Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 RPL30P2-201ENST00000414021 291 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 NDUFB4P7-201ENST00000423198 363 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 MTND3P23-201ENST00000431980 347 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 RPL35AP15-201ENST00000468042 339 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 RPL21P99-201ENST00000480369 423 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 RBBP4P6-201ENST00000508098 202 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 Y_RNA.665-201ENST00000516177 98 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 SNORA31.8-201ENST00000516327 108 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 RNU6-1314P-201ENST00000517139 104 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 MTND4P7-201ENST00000523876 130 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 MTCYBP13-201ENST00000578634 1093 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC021646.1-201ENST00000605469 484 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC010632.3-201ENST00000611377 369 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 MIR8058-201ENST00000615737 89 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AC100810.6-201ENST00000638068 285 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 AP001029.2-203ENST00000589795 4910 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC85CA6NKD9 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.71□□□□□ -1.65
CCDC85CA6NKD9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC85CA6NKD9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 SNORA51.2-201ENST00000364595 132 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 RNA5SP189-201ENST00000364920 115 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 RNU4-66P-201ENST00000365199 138 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 SNORA48.5-201ENST00000391143 135 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AL139095.1-201ENST00000404326 391 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 RNU4-26P-201ENST00000410270 107 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 RNU6-1148P-201ENST00000410992 104 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 PDCL2P1-201ENST00000419302 352 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 RPL7L1P10-201ENST00000427790 463 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AL591704.1-201ENST00000432574 275 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 S100A11P1-201ENST00000477525 312 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 CCDC34P1-201ENST00000507441 517 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 MTND3P22-201ENST00000510932 243 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 DPPA3P3-201ENST00000603842 430 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 AC034102.8-201ENST00000615146 484 ntBASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85CA6NKD9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 CEP170P1-201ENST00000502249 4587 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AP004289.2-201ENST00000444413 1457 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.167-201ENST00000363735 109 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RNU6-510P-201ENST00000391239 108 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RNA5SP241-201ENST00000391326 114 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RN7SKP32-201ENST00000410167 303 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 RPL27AP8-201ENST00000424277 446 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 BTF3P6-201ENST00000448054 499 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.638-201ENST00000459374 113 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AC007547.1-201ENST00000462177 490 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AP000942.1-201ENST00000463969 747 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 MTCO3P9-201ENST00000506989 781 ntBASIC4.7□□□□□ -1.66
CCDC85CA6NKD9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms