Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL159153.1-201ENST00000619688 317 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC025031.4-201ENST00000621248 3271 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SHISA3A0PJX4 ZNF72P-201ENST00000425869 1908 ntBASIC4.33□□□□□ -1.72
SHISA3A0PJX4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC116096.1-201ENST00000566804 2314 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 MIR412-201ENST00000362142 91 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 SNORA51.1-201ENST00000363243 140 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 RNU6-770P-201ENST00000363929 105 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 RNU6-512P-201ENST00000364438 103 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.376-201ENST00000365638 108 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.478-201ENST00000384358 107 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 Y_RNA.483-201ENST00000384380 101 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 LAP3P1-201ENST00000403648 294 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 SUMO1P3-201ENST00000439961 304 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 RPS26P2-201ENST00000440331 348 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 SUMO1P2-201ENST00000452524 304 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 U8.21-201ENST00000459536 136 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 RN7SL517P-201ENST00000462240 305 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 RN7SL51P-201ENST00000468230 285 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 HMGN2P13-201ENST00000476476 274 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC110792.1-201ENST00000491826 472 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 FTH1P9-201ENST00000513251 355 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC084851.1-201ENST00000529105 249 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC007375.1-201ENST00000554513 578 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC007225.2-201ENST00000562529 256 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 MIR3128-201ENST00000581957 66 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 MIR4505-201ENST00000582238 73 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 RPS29P30-201ENST00000600975 111 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AL161798.1-201ENST00000604630 131 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC008962.1-201ENST00000605729 304 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC109309.2-201ENST00000612597 332 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AC130454.1-201ENST00000622948 401 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 AL049555.1-201ENST00000562834 1933 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 PABPC1P6-201ENST00000445594 1829 ntBASIC4.32□□□□□ -1.72
SHISA3A0PJX4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHISA3A0PJX4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RPL9P7-201ENST00000330965 580 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RN7SKP104-201ENST00000362605 328 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RNA5SP319-201ENST00000362768 119 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RN7SKP113-201ENST00000363891 295 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RNY3P11-201ENST00000364153 102 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RNU6-1317P-201ENST00000364582 104 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 SNORA20.1-201ENST00000364790 130 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RNU6-398P-201ENST00000384143 109 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 SNORA70.10-201ENST00000384515 134 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 MIR514A1-201ENST00000385133 98 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 MIR628-201ENST00000385229 95 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RNU1-77P-201ENST00000390868 162 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RNU6-700P-201ENST00000391043 107 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RNU2-38P-201ENST00000410856 79 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AL158156.1-201ENST00000422509 473 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AC092573.2-201ENST00000434546 243 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AL513043.1-201ENST00000439124 535 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 NDUFB1P2-201ENST00000449477 176 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 OR2AQ1P-201ENST00000451972 200 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RPL9P9-202ENST00000466501 579 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RN7SL817P-201ENST00000480777 288 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AC108145.1-201ENST00000503770 153 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RN7SKP40-201ENST00000517211 242 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AC126177.5-201ENST00000549599 178 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AC090517.1-201ENST00000569307 266 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 AL158827.2-201ENST00000602494 330 ntBASIC4.31□□□□□ -1.72
SHISA3A0PJX4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHISA3A0PJX4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms