Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC068135.2-201ENST00000569293 1028 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 MIR4529-201ENST00000578110 78 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC021749.1-201ENST00000604322 607 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AP000254.1-201ENST00000609934 520 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 MIR7843-201ENST00000622274 79 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 AC040168.1-201ENST00000623594 991 ntBASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.31□□□□□ -2.2
TCRBV3S1A0A5B6 ZNF702P-202ENST00000434269 1966 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC008555.8-201ENST00000623602 2168 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 RNU4-23P-201ENST00000362839 140 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 RNU4-13P-201ENST00000364019 141 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 MIR504-201ENST00000385065 83 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 U8.13-201ENST00000390842 128 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 OR4K6P-201ENST00000416478 897 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 LINC01347-201ENST00000417964 355 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC003685.2-201ENST00000422795 395 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 RPL27AP8-201ENST00000424277 446 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AP000949.1-201ENST00000438328 629 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 RPL23AP3-201ENST00000453844 468 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 RPS29P29-201ENST00000456396 171 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 RPL30P5-201ENST00000494923 336 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 MTND4P2-201ENST00000507767 1203 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC091965.2-201ENST00000512324 613 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 SCARNA17.1-201ENST00000516211 143 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 SCARNA17.2-201ENST00000516334 143 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 SNORA48.10-201ENST00000516965 160 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC008676.3-201ENST00000521237 435 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 RANP3-201ENST00000530970 276 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC106782.4-201ENST00000568264 210 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 MIR4285-201ENST00000581001 85 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 BNIP3P33-201ENST00000598912 569 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 MTCO3P22-201ENST00000603219 784 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC012443.1-201ENST00000605605 231 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 SCARNA17.4-201ENST00000614296 143 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC006338.1-201ENST00000618453 749 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 AC018926.3-201ENST00000618841 406 ntBASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.3□□□□□ -2.2
TCRBV3S1A0A5B6 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-173P-201ENST00000364215 104 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 SNORA23-201ENST00000365128 182 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 USP9YP6-201ENST00000413550 854 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 HMGN2P3-201ENST00000433603 273 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 UBE2D3P1-201ENST00000436669 444 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 HMGN2P5-201ENST00000436882 273 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-420P-201ENST00000458780 107 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 snoU109.1-201ENST00000459339 135 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC068587.2-201ENST00000478386 781 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC017037.2-201ENST00000513850 890 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 SCARNA11.3-201ENST00000517276 130 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 MIR5571-201ENST00000577998 113 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC004775.1-201ENST00000607389 753 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC003001.2-201ENST00000616294 831 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC091304.6-201ENST00000619761 202 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC010872.1-201ENST00000624225 675 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC111188.2-201ENST00000529697 1387 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AC008568.2-201ENST00000623862 2313 ntBASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
TCRBV3S1A0A5B6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 RNU6-19P-201ENST00000384718 107 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AC016769.3-201ENST00000396562 315 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 OR9R1P-201ENST00000412200 877 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 HMGB1P49-201ENST00000418882 569 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AL009174.1-201ENST00000426577 416 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 Z93242.1-201ENST00000427102 353 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AL121601.2-201ENST00000438019 707 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 SNRPGP13-201ENST00000442212 177 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 RPL21P134-201ENST00000453468 483 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 RPL31P60-201ENST00000478450 367 ntBASIC1.28□□□□□ -2.2
TCRBV3S1A0A5B6 AC107032.1-201ENST00000485945 480 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms