Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU1-91P-201ENST00000364746 163 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-76P-201ENST00000384060 104 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR325-201ENST00000385260 98 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-1328P-201ENST00000410938 106 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AL139156.1-201ENST00000412785 841 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 NPM1P11-201ENST00000417106 855 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC008173.1-201ENST00000418901 264 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 SFR1P2-201ENST00000421841 730 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AL035407.1-201ENST00000429211 571 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 USP12PX-201ENST00000432383 1057 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 BNIP3P2-201ENST00000441221 577 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 PIGFP3-201ENST00000441918 722 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 SUMO2P6-201ENST00000505273 288 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 SCARNA15.2-201ENST00000516409 127 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC008127.2-201ENST00000549925 1075 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 MTCYBP27-201ENST00000555160 670 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AL391261.3-201ENST00000557194 520 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC090897.2-201ENST00000581715 130 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC068313.1-201ENST00000604028 1008 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC007938.3-201ENST00000604965 623 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORD14A-201ENST00000606526 91 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 TUG1_1.1-201ENST00000610654 145 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC005332.10-201ENST00000612725 619 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 SDR42E1P2-201ENST00000614861 481 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 SDR42E1P4-201ENST00000620894 481 ntBASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TRAV1-1A0A0B4J248 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC007785.2-201ENST00000598627 1916 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-839P-201ENST00000363347 108 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA3A-201ENST00000364113 130 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA16.1-201ENST00000364597 132 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORD48-201ENST00000364953 64 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 TMSB4XP8-201ENST00000402089 135 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA11.4-201ENST00000408823 129 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-920P-201ENST00000410926 92 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AL445183.3-201ENST00000414168 502 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 TMSB4XP6-201ENST00000415187 135 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AL158050.1-201ENST00000416077 457 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC092634.6-201ENST00000418558 192 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 TMSB4XP1-201ENST00000424567 135 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 RPL7P36-201ENST00000444633 681 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 MTND3P4-201ENST00000453537 303 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SUMO2P2-201ENST00000456482 255 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC092757.1-201ENST00000467293 467 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 OR4G11P-201ENST00000492842 939 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU4-29P-201ENST00000515943 174 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SCARNA17.1-201ENST00000516211 143 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SCARNA17.2-201ENST00000516334 143 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA31.23-201ENST00000517219 133 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC135628.1-201ENST00000568867 534 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 KATNBL1P5-201ENST00000605015 517 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AP001521.1-201ENST00000609150 300 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 SCARNA17.4-201ENST00000614296 143 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 AP001486.3-201ENST00000615334 372 ntBASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
TRAV1-1A0A0B4J248 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 MTND4P27-201ENST00000450813 1354 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AC010329.5-201ENST00000623497 2174 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA16B-201ENST00000364674 135 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 RNU6-217P-201ENST00000384164 104 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 SNORA36C-201ENST00000384289 132 ntBASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV1-1A0A0B4J248 AL356131.1-201ENST00000405826 414 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms