Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 VN1R42P-201ENST00000424651 344 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AL356867.1-201ENST00000429623 299 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 USP12PX-201ENST00000432383 1057 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC048346.1-201ENST00000510247 144 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 SCARNA15.2-201ENST00000516409 127 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 SNORA31.22-201ENST00000517204 135 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 HSPE1P18-201ENST00000517602 280 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC118942.1-201ENST00000529674 1035 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 MTCO1P40-201ENST00000574371 625 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 OR10AB1P-201ENST00000609613 938 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC006213.4-201ENST00000616184 634 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC244517.12-201ENST00000623581 663 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC073308.1-201ENST00000623696 305 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 MIR7515-201ENST00000637837 67 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 CENPCP1-201ENST00000533085 2578 ntBASIC1.52□□□□□ -2.17
TRAV3A0A0B4J244 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 CCT4P2-201ENST00000233836 1548 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-582P-201ENST00000362989 107 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 MTCO2P31-201ENST00000402702 684 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-1328P-201ENST00000410938 106 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL356379.1-201ENST00000414105 126 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL592310.1-201ENST00000414330 671 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 NPM1P11-201ENST00000417106 855 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 HMGN2P19-201ENST00000425149 265 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 MICF-203ENST00000432679 129 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL512844.2-201ENST00000433990 593 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 MTCYBP45-201ENST00000435243 565 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 HMGB3P12-201ENST00000438745 556 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 BNIP3P2-201ENST00000441221 577 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 PIGFP3-201ENST00000441918 722 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 MTCO1P48-201ENST00000448024 1096 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 NDUFA5P7-201ENST00000452914 242 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 USP9YP34-201ENST00000453983 808 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 GTF2IP12-201ENST00000456547 356 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 MTND4LP3-201ENST00000468320 276 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 RPL21P47-201ENST00000483696 477 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 YWHAEP4-201ENST00000505390 198 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 MIR514B-201ENST00000516774 80 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC022634.1-201ENST00000520765 532 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL391261.3-201ENST00000557194 520 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 ANP32BP3-201ENST00000559213 706 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC093519.1-201ENST00000566109 298 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC068313.1-201ENST00000604028 1008 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC005332.10-201ENST00000612725 619 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 uc_338.20-201ENST00000621563 178 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC104820.1-201ENST00000624183 307 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AL512506.2-201ENST00000624472 458 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC026634.1-201ENST00000634369 198 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 AC110994.2-201ENST00000635481 492 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 KPNA2P1-201ENST00000458289 1591 ntBASIC1.51□□□□□ -2.17
TRAV3A0A0B4J244 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 SNORA38-201ENST00000363946 132 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 SNORA3A-201ENST00000364113 130 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 SNORA16.1-201ENST00000364597 132 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-76P-201ENST00000384060 104 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-217P-201ENST00000384164 104 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 SNORD65C-201ENST00000390962 71 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 SNORA46.1-201ENST00000391069 153 ntBASIC1.5□□□□□ -2.17
TRAV3A0A0B4J244 AL035405.1-201ENST00000400795 710 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms