Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 AC109446.4-201ENST00000623235 2755 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 RNVU1-6-201ENST00000364688 164 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 RNU6-20P-201ENST00000384106 107 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 Z82210.1-201ENST00000440037 231 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 AL133244.1-201ENST00000456007 258 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 RPS29P27-201ENST00000463711 170 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 RPS27AP13-201ENST00000498403 237 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 MIR4691-201ENST00000583764 85 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 SRGNP1-201ENST00000603392 451 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 AC244107.2-201ENST00000611773 76 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 ZNF204P-201ENST00000416749 2397 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AC092593.1-201ENST00000515413 1815 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 U3.10-201ENST00000364459 214 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AL117339.3-201ENST00000418733 162 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AC073465.2-201ENST00000440938 498 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 snoU13.20-201ENST00000459180 104 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 RPL26P26-201ENST00000480251 434 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 GSTP1P1-201ENST00000548078 319 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 NDUFB4P11-201ENST00000560510 395 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 KLKP1-201ENST00000595979 403 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 uc_338.7-201ENST00000621834 124 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 MIR3658-201ENST00000636291 56 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC61Q9Y6R9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 AC100757.1-201ENST00000616872 1835 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 Y_RNA.172-201ENST00000363765 102 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 RNA5SP90-201ENST00000364801 99 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 OR1L6-202ENST00000373684 1044 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 CYB5AP4-201ENST00000396692 399 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 OR2AM1P-201ENST00000422137 422 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 RPL23AP3-201ENST00000453844 468 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 snoU109.4-201ENST00000458953 143 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 RNU6-1218P-201ENST00000458990 108 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 RNU6-567P-201ENST00000516746 107 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 AC060766.3-201ENST00000591442 263 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 AL162431.4-201ENST00000604674 411 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 AL022323.4-201ENST00000623980 13120 ntBASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC61Q9Y6R9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.21□□□□□ -1.25
CCDC61Q9Y6R9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC61Q9Y6R9 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC61Q9Y6R9 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC61Q9Y6R9 AL359955.1-201ENST00000455242 3275 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 COX6B1P1-201ENST00000415962 213 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 AL358472.1-201ENST00000431295 329 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 MTCO1P44-201ENST00000441935 243 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 RPS5P7-201ENST00000456664 608 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 RNU7-107P-201ENST00000459121 61 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms