Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC114781.4-201ENST00000513707 639 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 RNA5SP24-201ENST00000516478 95 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 SNORA31.18-201ENST00000517043 134 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 snoZ278.1-201ENST00000517059 112 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 SNORA31.22-201ENST00000517204 135 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AP001189.2-201ENST00000527320 189 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC004853.1-201ENST00000604902 698 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 AP003399.1-201ENST00000637534 361 ntBASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH1CQ9Y6N9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 RNU6-354P-201ENST00000383862 107 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 RNU6-610P-201ENST00000384264 107 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 MIR524-201ENST00000385242 87 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AL031679.1-201ENST00000400616 525 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 PTGES3P2-201ENST00000407942 482 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 MTATP6P27-201ENST00000416987 621 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 NANOGP5-201ENST00000424456 877 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 RPL17P35-201ENST00000432217 549 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC026410.2-201ENST00000460281 156 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC008427.1-201ENST00000503102 655 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AP002748.2-201ENST00000528671 348 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC124947.2-202ENST00000552735 133 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC004067.1-201ENST00000608733 700 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC009090.3-201ENST00000616553 565 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC009159.1-201ENST00000618386 642 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC008443.7-201ENST00000622195 246 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 AC007785.2-201ENST00000598627 1916 ntBASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
USH1CQ9Y6N9 Z99496.1-201ENST00000469424 1477 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 RNU6-609P-201ENST00000365459 107 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC005005.2-201ENST00000420779 380 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC098614.2-201ENST00000426040 255 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 FO393414.1-201ENST00000428697 1184 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 MTND4P15-201ENST00000437913 1033 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 BMI1P1-201ENST00000445879 941 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 RPL39P6-201ENST00000448289 150 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 RPS15AP17-201ENST00000470598 390 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC108734.3-201ENST00000481241 1165 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 SUMO2P6-201ENST00000505273 288 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 OR11H5P-201ENST00000554039 926 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC122134.1-202ENST00000569111 1201 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC138915.2-201ENST00000569776 97 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 OR10AB1P-201ENST00000609613 938 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AP005229.2-201ENST00000609980 697 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC093838.1-201ENST00000613014 469 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 HMGB1P24-202ENST00000615653 685 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC084824.4-201ENST00000620106 731 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 AC093591.3-201ENST00000634516 308 ntBASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH1CQ9Y6N9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
USH1CQ9Y6N9 RNU4-82P-201ENST00000362443 140 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 Y_RNA.25-201ENST00000362528 102 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RNU5B-1-201ENST00000363286 116 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MIR506-201ENST00000384998 124 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MCTS2P-201ENST00000394552 546 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 LUZP4P1-201ENST00000415420 344 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MTCO3P30-201ENST00000426425 670 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC092427.1-201ENST00000439177 601 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AL591719.1-201ENST00000444669 744 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MOB1AP2-201ENST00000446060 614 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 IFNA11P-201ENST00000446352 526 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MTCO3P11-201ENST00000455103 774 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC233279.1-201ENST00000455300 423 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms