Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RNU4-1-201ENST00000363925 141 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RNU5A-6P-201ENST00000384136 116 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RPL23AP82-202ENST00000427528 469 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RPL22P17-201ENST00000438729 315 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 MTND1P1-201ENST00000445453 368 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 MRPS31P2-201ENST00000451581 518 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AP1S2P1-201ENST00000457344 379 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RPS27AP1-201ENST00000475545 471 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC021382.1-201ENST00000483523 359 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RPL9P6-201ENST00000492764 598 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RNU1-61P-201ENST00000516107 151 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 MTND4LP26-201ENST00000518144 282 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 IGHV3-76-201ENST00000522465 295 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 OR5G4P-201ENST00000525251 760 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 TGIF1P1-201ENST00000558095 802 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC037471.2-201ENST00000564941 598 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 MTATP6P3-201ENST00000581686 676 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AL022154.1-201ENST00000604698 785 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RNU6-87P-201ENST00000607561 108 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AF250324.2-201ENST00000608299 610 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 OR10AB1P-201ENST00000609613 938 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC007684.1-201ENST00000609671 477 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC110801.1-201ENST00000623590 212 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 OR5AK4P-201ENST00000635912 903 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 AC017071.1-201ENST00000564407 2204 ntBASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SNX9Q9Y5X1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC009902.3-201ENST00000606235 2172 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 OR5J1P-201ENST00000313544 939 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 RNU6-821P-201ENST00000390995 107 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 RNU6-195P-201ENST00000411352 109 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC063979.1-201ENST00000415539 377 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 SPA17P1-201ENST00000416656 452 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 BX295541.1-201ENST00000417774 250 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 OR2B8P-201ENST00000432841 938 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 HMGN2P20-201ENST00000437531 273 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC073614.1-201ENST00000438690 650 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC108734.1-201ENST00000439549 399 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 BX510359.1-201ENST00000456973 237 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC055855.1-201ENST00000489563 579 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC017037.2-201ENST00000513850 890 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 Y_RNA.672-201ENST00000516289 104 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC107934.1-201ENST00000522215 217 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AL121603.1-201ENST00000553815 142 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 MIR4474-201ENST00000579189 78 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC068944.2-201ENST00000610373 403 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
SNX9Q9Y5X1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms