Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 Z82217.1-201ENST00000625157 8149 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 DEFB108F-201ENST00000344638 222 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 SNORA7.2-201ENST00000364446 145 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-61P-201ENST00000365528 109 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-946P-201ENST00000383878 107 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-701P-201ENST00000384059 107 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-193P-201ENST00000410977 107 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC108032.1-201ENST00000416706 207 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RPL36AP53-201ENST00000432891 316 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 GOT2P5-201ENST00000433995 546 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RPL21P112-201ENST00000434403 463 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 MTND4LP16-201ENST00000440828 295 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 HMGN1P12-201ENST00000499125 195 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC091885.1-201ENST00000506658 268 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC114786.4-201ENST00000508771 728 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC108078.2-201ENST00000510750 236 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-352P-201ENST00000516908 107 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC103843.2-201ENST00000530523 682 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 BNIP3P6-201ENST00000549284 499 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 MIR4703-201ENST00000577728 79 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AL121757.2-201ENST00000611223 313 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC011155.2-201ENST00000623202 216 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AL359697.1-201ENST00000624879 587 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AC103710.2-202ENST00000641454 2853 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 AP001350.1-201ENST00000601906 1524 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 OR4G1P-203ENST00000641984 1631 ntBASIC4.1□□□□□ -1.75
PCDHB1Q9Y5F3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC018529.3-201ENST00000624212 2254 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 Y_RNA.11-201ENST00000362375 109 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RNU6-552P-201ENST00000362869 119 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 Y_RNA.279-201ENST00000364763 95 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RHOT1P2-201ENST00000366423 333 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 SMIM11P1-201ENST00000369586 178 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 SOD2P1-201ENST00000396543 562 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 OR6C66P-201ENST00000414917 930 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RPL7L1P10-201ENST00000427790 463 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 SRIP2-201ENST00000428470 166 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 CBWD4P-201ENST00000445695 655 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 FGF7P3-201ENST00000454645 303 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 snoU13.4-201ENST00000458916 104 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC010469.1-201ENST00000463864 576 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RPL23AP11-201ENST00000475260 469 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 HSPE1P6-201ENST00000479457 291 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RN7SL271P-201ENST00000487601 295 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC106872.2-201ENST00000494303 480 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RPL29P14-201ENST00000495837 428 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 EIF4EP3-201ENST00000498782 656 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC004062.1-201ENST00000509926 645 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC010486.1-201ENST00000511793 424 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RNU4-29P-201ENST00000515943 174 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 RN7SKP258-201ENST00000517151 304 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 SUB1P1-201ENST00000524415 382 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AP005435.4-201ENST00000529514 284 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 OR5B10P-201ENST00000532869 642 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC018638.8-201ENST00000588755 281 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC011712.1-201ENST00000588959 234 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms