Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 RNU6-339P-201ENST00000384310 107 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AL356432.1-201ENST00000405809 419 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 SMC4P1-201ENST00000414479 527 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AIMP1P2-201ENST00000425294 312 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC007677.1-201ENST00000445757 515 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC068587.2-201ENST00000478386 781 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 PCNAP1-201ENST00000505363 709 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC010486.1-201ENST00000511793 424 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 SNORA25.15-201ENST00000516487 89 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC018630.1-201ENST00000541376 925 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 MTCO3P22-201ENST00000603219 784 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AL355877.2-201ENST00000603670 358 ntBASIC1.27□□□□□ -2.21
AP4S1Q9Y587 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
AP4S1Q9Y587 AC111188.2-201ENST00000529697 1387 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 MIR126-201ENST00000362291 85 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 RNU6-203P-201ENST00000384038 104 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 SNORA67.6-201ENST00000391093 99 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AL589655.1-201ENST00000405398 482 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC234781.2-201ENST00000426370 994 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 Z93242.1-201ENST00000427102 353 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC093106.2-201ENST00000428212 385 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 BUD31P2-201ENST00000449374 300 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 RPL21P134-201ENST00000453468 483 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AL049873.1-201ENST00000480540 376 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC107032.1-201ENST00000485945 480 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC091965.2-201ENST00000512324 613 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 RN7SKP96-201ENST00000516948 297 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC078899.2-201ENST00000595282 212 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 AC109454.4-201ENST00000623411 649 ntBASIC1.26□□□□□ -2.21
AP4S1Q9Y587 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
AP4S1Q9Y587 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 RNU4-13P-201ENST00000364019 141 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 Y_RNA.510-201ENST00000384511 114 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 MIR147B-201ENST00000390185 80 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 U8.13-201ENST00000390842 128 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 RNU6-712P-201ENST00000410558 100 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 HMGN2P3-201ENST00000433603 273 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 HMGN2P5-201ENST00000436882 273 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 YWHAZP8-201ENST00000436935 731 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 OR6C72P-201ENST00000451403 892 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 RNU7-23P-201ENST00000459465 62 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC025181.1-201ENST00000477507 416 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 snoZ278.1-201ENST00000517059 112 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC008562.1-201ENST00000521763 330 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC106782.4-201ENST00000568264 210 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 MIR4529-201ENST00000578110 78 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 BNIP3P22-201ENST00000593399 556 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC091834.1-201ENST00000614543 472 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC068620.4-201ENST00000636730 1182 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 AC010149.2-201ENST00000637608 315 ntBASIC1.25□□□□□ -2.21
AP4S1Q9Y587 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.25□□□□□ -2.21
AP4S1Q9Y587 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AL161722.3-201ENST00000605789 2983 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 RNU6-1159P-201ENST00000362933 107 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 SNORA11-201ENST00000408789 128 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 UBE2FP1-201ENST00000416536 447 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC016691.1-201ENST00000441321 413 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.24□□□□□ -2.21
AP4S1Q9Y587 KATNBL1P4-201ENST00000503545 918 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC112518.2-201ENST00000508565 425 ntBASIC1.24□□□□□ -2.21
AP4S1Q9Y587 AC021146.7-201ENST00000509604 775 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms