Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-111P-201ENST00000517179 105 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 ERHP1-201ENST00000523006 310 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 MIR5692A1-201ENST00000580523 69 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 AL160281.1-201ENST00000605307 311 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 AL139124.1-201ENST00000609123 421 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 AL359893.1-201ENST00000447628 1580 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 AC063976.2-201ENST00000425667 3556 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 AC092681.1-201ENST00000297369 291 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 MIR628-201ENST00000385229 95 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 U3.30-201ENST00000391308 210 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 AL137014.1-201ENST00000420490 1226 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RPS15AP6-201ENST00000420703 385 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RPS12P10-201ENST00000427031 377 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 PRELID3BP1-201ENST00000457142 540 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RPL21P41-201ENST00000459863 264 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 TRBVB-201ENST00000477100 408 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RPL7P23-201ENST00000493874 747 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 OR1M4P-201ENST00000589199 287 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 HMGB2P1-201ENST00000591146 634 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 VN1R91P-201ENST00000594377 169 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 RPS29P30-201ENST00000600975 111 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 MIR1244-1-201ENST00000612829 85 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 MIR1244-3-201ENST00000635744 85 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 MIR1244-2-201ENST00000636449 85 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 MIR1244-4-202ENST00000636813 85 ntBASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ZC3H4Q9UPT8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
ZC3H4Q9UPT8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ZC3H4Q9UPT8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 Y_RNA.478-201ENST00000384358 107 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 SNORA11F-201ENST00000408237 128 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 CYCSP10-201ENST00000417973 294 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 HMGB1P25-201ENST00000468402 607 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 AC091167.1-201ENST00000492017 396 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 Y_RNA.687-201ENST00000516558 91 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-840P-201ENST00000517275 65 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 CYCSP29-201ENST00000533731 318 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 AL390123.1-201ENST00000603216 237 ntBASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
ZC3H4Q9UPT8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 THAP12P5-201ENST00000405864 2275 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-263P-201ENST00000363811 107 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-933P-201ENST00000384424 107 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-174P-201ENST00000410406 106 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AL590135.1-201ENST00000422215 156 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AC004866.2-201ENST00000438285 481 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 DAP3P1-201ENST00000441522 278 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 RN7SL814P-201ENST00000487715 300 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-897P-201ENST00000517135 105 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 RN7SKP234-201ENST00000517173 224 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AP003733.2-201ENST00000529409 171 ntBASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.95□□□□□ -1.46
ZC3H4Q9UPT8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms