Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 KC877982.1-201ENST00000602313 470 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 AP001981.2-201ENST00000603241 418 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 AC069234.5-201ENST00000611056 416 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 AC107871.2-201ENST00000612894 502 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 AC092140.2-201ENST00000618027 521 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 AC068057.2-201ENST00000624047 895 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 AC010149.2-201ENST00000637608 315 ntBASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.31□□□□□ -1.88
CPSF2Q9P2I0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 RNA5SP139-201ENST00000364340 117 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 RNU5E-5P-201ENST00000365379 116 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 SNORA5A-201ENST00000384111 134 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 RNU6-278P-201ENST00000390945 109 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 MIR1193-201ENST00000408109 78 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 Y_RNA.608-201ENST00000410647 95 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 PIGFP3-201ENST00000441918 722 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 RPL7P15-201ENST00000461190 712 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 MTND3P7-201ENST00000474435 343 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 KC877373.1-201ENST00000479066 408 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC107934.1-201ENST00000522215 217 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 HMGB1P6-201ENST00000569046 646 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC015917.1-201ENST00000579654 510 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 GLUD1P4-201ENST00000590914 418 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 DPPA3P3-201ENST00000603842 430 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 BX664608.1-201ENST00000610519 487 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AL392048.1-201ENST00000613946 534 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 uc_338.12-201ENST00000616344 181 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 MTND1P37-201ENST00000636562 264 ntBASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CPSF2Q9P2I0 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 RNU4-35P-201ENST00000362588 141 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 RNU6-1284P-201ENST00000363701 100 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 SNORD21-201ENST00000383953 95 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 SNORD17-201ENST00000390930 237 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 SNORA57.1-201ENST00000391227 145 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AL357075.1-201ENST00000404107 726 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 RNA5SP44-201ENST00000410446 133 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC244035.1-201ENST00000430042 390 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 RN7SL601P-201ENST00000471221 293 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 OSBPL9P5-201ENST00000542581 171 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC005476.1-201ENST00000554427 397 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 MIR548AB-201ENST00000584917 84 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC012065.4-201ENST00000602445 679 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC121334.2-201ENST00000605387 271 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC012360.2-201ENST00000609349 391 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC138749.5-201ENST00000611461 208 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC116165.2-201ENST00000616705 206 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC002064.3-201ENST00000623448 346 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC091931.1-201ENST00000623488 728 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 AC091953.2-201ENST00000623979 160 ntBASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF2Q9P2I0 ZNF833P-201ENST00000424938 1494 ntBASIC3.28□□□□□ -1.88
CPSF2Q9P2I0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF2Q9P2I0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CPSF2Q9P2I0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms