Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 U3.40-201ENST00000408706 208 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 RNU2-20P-201ENST00000410425 191 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 Z82205.1-201ENST00000428456 297 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AC093422.3-201ENST00000428506 305 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 MTND4LP7-201ENST00000431728 294 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 RPL7P54-201ENST00000438336 674 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 BOLA3P3-201ENST00000505182 232 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 MTND3P24-201ENST00000506306 329 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AC048346.1-201ENST00000510247 144 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AC090666.1-201ENST00000578241 445 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AC026741.1-201ENST00000605892 482 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 MTND2P41-201ENST00000637599 773 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 CENPCP1-201ENST00000533085 2578 ntBASIC1.72□□□□□ -2.13
CCDC88CQ9P219 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CCDC88CQ9P219 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 RNU6-543P-201ENST00000362576 108 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 SET-203ENST00000372688 801 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 RNU6-796P-201ENST00000391086 107 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 RPS3AP9-201ENST00000417027 792 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC108667.1-201ENST00000428618 249 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 RSL24D1P8-201ENST00000434442 492 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC113155.1-201ENST00000511141 769 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 BNIP3P4-201ENST00000604946 565 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 ZNF355P-201ENST00000427301 3216 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AL354685.2-201ENST00000448218 1447 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 RNU6-619P-201ENST00000365146 108 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 RPL27AP8-201ENST00000424277 446 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AL592045.1-201ENST00000429867 352 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AL645568.3-201ENST00000433683 316 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 LSM6P2-201ENST00000552208 177 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AL450270.1-201ENST00000606160 391 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.71□□□□□ -2.14
CCDC88CQ9P219 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC88CQ9P219 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 HSPA8P4-201ENST00000511877 1920 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 SNORD51-201ENST00000384320 80 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 MIR1294-201ENST00000408503 142 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 RN7SKP101-201ENST00000411376 320 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 IPO7P1-201ENST00000442031 636 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 RNF2P1-201ENST00000442955 1010 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 SSXP1-201ENST00000453640 473 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC010099.1-201ENST00000455434 375 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 RNU6-420P-201ENST00000458780 107 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC011611.5-201ENST00000552477 578 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 MIR5089-201ENST00000580047 84 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AP001033.2-201ENST00000609701 1003 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC020658.4-201ENST00000613987 684 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC009318.4-201ENST00000620496 486 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC027309.3-201ENST00000623419 351 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 AC079597.1-201ENST00000624306 508 ntBASIC1.7□□□□□ -2.14
CCDC88CQ9P219 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
CCDC88CQ9P219 RNU6-921P-201ENST00000384361 107 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AL355497.1-201ENST00000406262 551 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 UBE2D3P2-201ENST00000424409 445 ntBASIC1.69□□□□□ -2.14
CCDC88CQ9P219 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC88CQ9P219 RPL32P14-201ENST00000463196 378 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms