Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CISD1P1-201ENST00000393907 327 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 RNU2-71P-201ENST00000411395 189 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC092809.3-201ENST00000415453 231 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC245054.1-201ENST00000420944 258 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 NDUFB4P7-201ENST00000423198 363 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 RBMY1KP-201ENST00000423480 476 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AL591704.1-201ENST00000432574 275 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 VDAC1P3-201ENST00000434069 851 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AF228730.2-201ENST00000438784 848 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC093019.1-201ENST00000443135 252 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 HMGB3P22-202ENST00000451823 572 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC087588.1-201ENST00000462203 316 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 RPS20P22-201ENST00000473700 357 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC025554.1-201ENST00000505641 188 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.665-201ENST00000516177 98 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 RNU6-1314P-201ENST00000517139 104 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC087241.2-201ENST00000535801 324 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC243972.3-201ENST00000539655 198 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC106785.1-201ENST00000565935 262 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC022893.3-201ENST00000607665 437 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC107294.1-201ENST00000609524 467 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 AC006023.2-201ENST00000609916 167 ntBASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.14□□□□□ -1.75
CCM2LQ9NUG4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 ZNF962P-201ENST00000443465 3140 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC006971.1-201ENST00000407916 4486 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 RNA5SP509-201ENST00000364577 119 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 SNORD66.1-201ENST00000391230 76 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 HSPE1P8-201ENST00000406997 288 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 MTCO3P46-201ENST00000425787 232 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 MTND3P23-201ENST00000431980 347 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AL590639.1-201ENST00000456484 337 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC004801.2-202ENST00000463559 283 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 RPL21P104-201ENST00000464143 478 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.654-201ENST00000497848 106 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 ATP5F1P5-201ENST00000526403 760 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC106782.4-201ENST00000568264 210 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC069061.3-201ENST00000582254 823 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC069234.5-201ENST00000611056 416 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC023043.4-201ENST00000612081 449 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AC103858.2-201ENST00000621471 543 ntBASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
CCM2LQ9NUG4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 RNU6-82P-201ENST00000363970 107 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.263-201ENST00000364659 114 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 RNU6-510P-201ENST00000391239 108 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 RPS12P24-201ENST00000412619 387 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 RPL35AP12-201ENST00000425362 338 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AL162591.2-201ENST00000449634 317 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 RNU6-1208P-201ENST00000459588 107 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC034236.1-201ENST00000469891 373 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC006517.1-201ENST00000480485 328 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 SNORA70.16-201ENST00000516390 95 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 NARSP2-201ENST00000518524 679 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 BTF3P12-201ENST00000519620 469 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 RPL7P20-201ENST00000520308 745 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC022690.1-201ENST00000526681 550 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 OR5D17P-201ENST00000531492 978 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms