Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC004908.2-201ENST00000609090 574 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC006111.3-201ENST00000622137 383 ntBASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.81□□□□□ -1.8
SMC4Q9NTJ3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 Y_RNA.560-201ENST00000384689 102 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 AL109755.1-201ENST00000401791 649 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 SDCBPP3-201ENST00000419629 891 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 AC008850.1-201ENST00000427546 362 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 TAAR7P-201ENST00000436141 242 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 BZW1P2-201ENST00000473537 826 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 BET1P1-201ENST00000482276 359 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 RPL23AP41-201ENST00000484754 458 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 GMPSP1-201ENST00000514075 579 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 SNORA31.1-201ENST00000515993 133 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 RN7SKP43-201ENST00000516173 320 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 SNORA31.5-201ENST00000516190 133 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 PCMTD1P2-201ENST00000565017 355 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 MIR7844-201ENST00000616161 122 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 AC012150.2-201ENST00000621300 544 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 GABRG2-229ENST00000641017 3628 ntBASIC3.8□□□□□ -1.8
SMC4Q9NTJ3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 MAPK10-322ENST00000641485 4530 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AL035425.3-201ENST00000564206 4996 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 Y_RNA.97-201ENST00000363094 102 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RNU6-553P-201ENST00000364047 96 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 MIR19A-201ENST00000384878 82 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AC009237.8-201ENST00000445492 379 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RPL36AP33-201ENST00000450395 310 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RPL21P41-201ENST00000459863 264 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RPL27AP5-201ENST00000469428 449 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 HMGN2P13-201ENST00000476476 274 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RPS29P2-201ENST00000479278 136 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RPL30P14-201ENST00000482744 348 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 CDC42P4-201ENST00000510507 563 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RNU6-1003P-201ENST00000517099 105 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 OR5G4P-201ENST00000525251 760 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AP002404.1-201ENST00000532005 451 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AC124947.2-202ENST00000552735 133 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AC015871.2-201ENST00000603605 948 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 AC092125.1-201ENST00000562568 1995 ntBASIC3.79□□□□□ -1.8
SMC4Q9NTJ3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AL353743.1-202ENST00000431724 1695 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 SNORD116-8-201ENST00000384365 95 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AL138885.1-201ENST00000405921 675 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 RN7SKP123-201ENST00000410732 291 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 RNA5SP38-201ENST00000410750 119 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AL365203.2-201ENST00000423444 196 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 RNU7-59P-201ENST00000459101 61 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC055855.1-201ENST00000489563 579 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC005178.1-201ENST00000508392 440 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AL355836.1-201ENST00000555951 870 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AL133153.1-201ENST00000557756 303 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 WISP1-OT1-201ENST00000602893 642 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC004832.5-201ENST00000608677 401 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 AC027309.3-201ENST00000623419 351 ntBASIC3.78□□□□□ -1.8
SMC4Q9NTJ3 OR4G2P-202ENST00000641004 1759 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms