Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC118273.1-201ENST00000525324 3006 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 EI24P2-201ENST00000397776 1076 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 RN7SKP202-201ENST00000410439 330 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 ZNF90P2-204ENST00000419323 1075 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AL358934.1-201ENST00000432346 324 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 C1DP4-201ENST00000455429 424 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC091153.1-201ENST00000466297 402 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 RPS3AP17-201ENST00000472594 777 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 RN7SL132P-201ENST00000478131 296 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC011825.1-201ENST00000484967 388 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC110768.1-201ENST00000509222 400 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC090572.1-201ENST00000519251 160 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 RPL21P12-201ENST00000559810 515 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC010546.1-201ENST00000569391 485 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC053481.4-201ENST00000583164 216 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC006130.2-201ENST00000586202 326 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC013553.2-201ENST00000604244 589 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AL136363.1-201ENST00000605349 337 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC012557.2-201ENST00000605919 418 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AP002360.4-201ENST00000606980 481 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 MIR92B-201ENST00000607575 96 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AL592295.2-201ENST00000612578 206 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AL390240.1-201ENST00000612950 384 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC005344.1-201ENST00000613391 459 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 AC098679.4-201ENST00000624241 654 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 MTND5P26-201ENST00000426018 1752 ntBASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC6A13Q9NSD5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AL137003.2-201ENST00000606924 2538 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AP004289.2-201ENST00000444413 1457 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-960P-201ENST00000364056 120 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-39P-201ENST00000384344 107 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 U8.11-201ENST00000384699 133 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 U8.12-201ENST00000384701 133 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC091390.3-201ENST00000426478 338 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 MED13P1-201ENST00000428342 171 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 HMGB3P12-201ENST00000438745 556 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC009237.8-201ENST00000445492 379 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 CBWD4P-201ENST00000445695 655 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 MTCYBP1-201ENST00000454315 1119 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 U8.18-201ENST00000459285 133 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 RPS20P22-201ENST00000473700 357 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-927P-201ENST00000516199 100 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC011602.1-201ENST00000546484 331 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AL845331.3-202ENST00000562856 261 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC002545.1-201ENST00000592511 181 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 PLCE1P1-201ENST00000622094 305 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AL359740.1-201ENST00000624340 592 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 AC084035.1-201ENST00000634543 607 ntBASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC6A13Q9NSD5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC007823.1-201ENST00000569932 1566 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC073343.1-201ENST00000328239 651 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 Y_RNA.296-201ENST00000364930 108 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-282P-201ENST00000365357 103 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-108P-201ENST00000365558 107 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms