Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC005951.2-201ENST00000576282 495 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 RAC1P9-201ENST00000604990 392 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AL591926.8-201ENST00000616876 211 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC127024.6-201ENST00000621598 424 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AL031601.2-202ENST00000622650 282 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 Y_RNA.64-201ENST00000362845 102 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RNU4-44P-201ENST00000363050 141 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RNA5SP510-201ENST00000364697 99 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 Y_RNA.534-201ENST00000384599 112 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 Y_RNA.562-201ENST00000384695 113 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RNU6-712P-201ENST00000410558 100 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AL030996.1-201ENST00000411430 235 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AL137014.1-201ENST00000420490 1226 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AL645608.4-201ENST00000423619 154 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RPL7P2-201ENST00000427639 268 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RPL21P91-201ENST00000429231 479 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 AC016712.1-201ENST00000431088 378 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RPL37P6-201ENST00000460682 294 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AC008897.1-201ENST00000494006 347 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AC093852.1-201ENST00000503587 266 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RNA5SP228-201ENST00000516232 133 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 RNU6-914P-201ENST00000516749 109 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 LRRC37A5P-203ENST00000580181 585 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AL160281.1-201ENST00000605307 311 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 AL355810.1-201ENST00000614629 552 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 SDR42E1P2-201ENST00000614861 481 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 ZNF285B-201ENST00000561698 1767 ntBASIC4.72□□□□□ -1.65
SSU72Q9NP77 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSU72Q9NP77 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SSU72Q9NP77 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSU72Q9NP77 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSU72Q9NP77 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 Y_RNA.14-201ENST00000362415 103 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 SNORA70-201ENST00000384436 135 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 RNU6-713P-201ENST00000384761 107 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 RNU2-43P-201ENST00000410306 190 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 RNU6-607P-201ENST00000411283 108 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 AL161636.2-201ENST00000445179 927 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 YRDCP3-201ENST00000456507 480 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 RNU6-953P-201ENST00000459154 107 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC018638.3-201ENST00000461273 132 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC104109.1-201ENST00000498563 436 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 RN7SKP40-201ENST00000517211 242 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 OR5D17P-201ENST00000531492 978 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 SNRPGP16-201ENST00000533275 226 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 AL589674.2-201ENST00000604304 337 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC005344.1-201ENST00000613391 459 ntBASIC4.71□□□□□ -1.66
SSU72Q9NP77 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSU72Q9NP77 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSU72Q9NP77 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSU72Q9NP77 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSU72Q9NP77 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
SSU72Q9NP77 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms