Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC108706.1-201ENST00000611053 297 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 XIAPP3-201ENST00000312918 795 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 RPL17P12-201ENST00000413391 526 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 CR848007.2-201ENST00000424918 787 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC004941.2-201ENST00000427009 228 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 UBE2V1P13-201ENST00000436983 439 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC008379.1-201ENST00000463655 464 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC098583.1-201ENST00000480875 255 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 VN1R107P-201ENST00000601784 209 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 RNA5SP295-201ENST00000362655 121 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 SNORA51.10-201ENST00000384418 136 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 PGBD4P6-201ENST00000421501 610 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AC068446.3-201ENST00000555285 382 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 RNU6-1305P-201ENST00000364353 104 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 MIR1912-201ENST00000410389 80 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 RPL26P9-201ENST00000457466 433 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 RPS23P3-201ENST00000470993 430 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AC098799.2-201ENST00000509466 868 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 U73023.1-201ENST00000603134 700 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AC123912.5-201ENST00000605470 343 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AP006248.3-201ENST00000623580 594 ntBASIC1.13□□□□□ -2.23
CHD8Q9HCK8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.13□□□□□ -2.23
CHD8Q9HCK8 AL118496.1-201ENST00000440201 1812 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 RNU2-37P-201ENST00000410695 177 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 RNU6-603P-201ENST00000411403 107 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC092902.1-201ENST00000486999 259 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 MTCO3P24-201ENST00000572729 782 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC083899.3-201ENST00000603413 594 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AL590099.1-201ENST00000615276 138 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AL121594.5-201ENST00000631724 573 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC024619.4-201ENST00000580924 316 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AL356118.1-201ENST00000635272 1078 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC012321.1-201ENST00000561622 1588 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC245060.5-201ENST00000610778 3293 ntBASIC1.12□□□□□ -2.23
CHD8Q9HCK8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CHD8Q9HCK8 AC011477.1-204ENST00000623416 1325 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.11□□□□□ -2.23
CHD8Q9HCK8 CASP3P1-201ENST00000446037 609 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AP005435.4-201ENST00000529514 284 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AC000123.2-201ENST00000623124 461 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHD8Q9HCK8 SNORD114-15-201ENST00000364687 72 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 RNU6-17P-201ENST00000384245 107 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 RNU6-18P-201ENST00000384527 107 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 HMGN2P38-201ENST00000423806 265 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 Y_RNA.644-201ENST00000459006 113 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 HMGN1P10-201ENST00000474557 553 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.11□□□□□ -2.23
CHD8Q9HCK8 RNA5SP309-201ENST00000516670 106 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AC016877.3-201ENST00000606778 504 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AC005156.1-201ENST00000613371 573 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.11□□□□□ -2.23
CHD8Q9HCK8 AC132825.8-201ENST00000640783 297 ntBASIC1.11□□□□□ -2.23
CHD8Q9HCK8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 Z86062.1-201ENST00000406773 777 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 AC099336.2-201ENST00000422457 254 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 U8.9-201ENST00000365667 134 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 SNRPEP2-201ENST00000397592 279 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 RNA5SP25-201ENST00000410815 110 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 SNRPFP2-201ENST00000440710 251 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 SNRPGP3-201ENST00000469405 227 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms