Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AL451074.3-201ENST00000437709 472 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC125238.1-201ENST00000448842 249 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 HMGB3P8-201ENST00000449709 577 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 FCF1P8-201ENST00000510322 597 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AF213884.2-201ENST00000510417 903 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 RNU6-506P-201ENST00000516553 94 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 MTND1P5-201ENST00000517906 940 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 MIR4444-1-201ENST00000581696 74 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 MIR4444-2-201ENST00000584390 74 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 NRBF2P1-201ENST00000587407 859 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC007038.2-201ENST00000608095 740 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 RPL7P26-201ENST00000333817 754 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 MIR490-201ENST00000384865 128 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 MIR19A-201ENST00000384878 82 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 MIR670-201ENST00000390142 98 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AL137014.1-201ENST00000420490 1226 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 Z99127.3-201ENST00000448158 395 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 RPS27AP1-201ENST00000475545 471 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC114797.1-201ENST00000514003 728 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 RNU6-1095P-201ENST00000516148 108 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 MTCYBP41-201ENST00000528913 1123 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AL121603.1-201ENST00000553815 142 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 OR4T1P-201ENST00000554933 911 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 COX6CP3-201ENST00000580869 223 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC008739.3-201ENST00000603262 127 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC245014.2-201ENST00000603689 287 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC246785.4-201ENST00000605374 287 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AL355365.1-201ENST00000616480 294 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AC006338.1-201ENST00000618453 749 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 AL672296.1-201ENST00000427780 2158 ntBASIC3.43□□□□□ -1.86
PCDH9Q9HC56 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDH9Q9HC56 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 AL049781.1-201ENST00000623195 3585 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 OR5J1P-201ENST00000313544 939 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 U3.11-201ENST00000364476 212 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 RNY3P13-201ENST00000365542 102 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 MIR135A2-201ENST00000384854 100 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 RNU6-278P-201ENST00000390945 109 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 RPL23AP32-201ENST00000395315 459 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 GSTA9P-201ENST00000406231 611 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 RNU6-516P-201ENST00000411381 104 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 SSXP9-201ENST00000417503 292 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 BEND7P1-201ENST00000422058 457 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 VDAC1P3-201ENST00000434069 851 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 TIMM9P1-201ENST00000436122 256 ntBASIC3.42□□□□□ -1.86
PCDH9Q9HC56 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDH9Q9HC56 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms