Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 MIR6852-201ENST00000621699 66 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AL356596.1-201ENST00000624230 379 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.96□□□□□ -1.93
RNF41Q9H4P4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 RPL21P132-201ENST00000331267 462 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 RNU6-359P-201ENST00000365466 108 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 RNA5SP88-201ENST00000365560 109 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC107081.1-201ENST00000414975 361 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 BEND7P1-201ENST00000422058 457 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 RPL7P34-201ENST00000433316 712 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 SNRPEP7-201ENST00000438350 220 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 MTND5P2-201ENST00000442927 1142 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC104685.1-201ENST00000502445 371 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC093809.1-201ENST00000509155 340 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC004062.1-201ENST00000509926 645 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC024589.1-201ENST00000512207 263 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC103783.1-201ENST00000520506 373 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC234778.2-201ENST00000566241 354 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC002400.1-201ENST00000569310 726 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 MTCO3P13-201ENST00000577757 781 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 BDH2P1-201ENST00000602288 736 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AL109653.1-201ENST00000603091 248 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC002550.2-201ENST00000621246 394 ntBASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF41Q9H4P4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 Z82195.2-201ENST00000612348 18351 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RNU6-744P-201ENST00000365557 107 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RNU6-1316P-201ENST00000384242 108 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 TAS2R15P-201ENST00000390674 928 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL590084.2-201ENST00000401481 382 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL136372.1-201ENST00000403060 228 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RN7SKP266-201ENST00000410232 287 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 SSXP9-201ENST00000417503 292 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC083875.1-201ENST00000419509 405 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 BX119904.4-201ENST00000424402 301 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RSU1P2-202ENST00000437884 485 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC104389.3-201ENST00000445629 235 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RPL23AP35-201ENST00000451906 501 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 OR6C5P-201ENST00000452388 923 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 OR6K1P-201ENST00000456766 971 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 snoU13.4-201ENST00000458916 104 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC098862.1-201ENST00000504991 413 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 KLHL2P1-201ENST00000508691 521 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RNA5SP216-201ENST00000516111 123 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 SNORA31.8-201ENST00000516327 108 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC007621.1-201ENST00000604544 437 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 BCRP9-201ENST00000605312 388 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC097468.3-201ENST00000607956 456 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL360219.1-201ENST00000610230 366 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL590099.1-201ENST00000615276 138 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL031667.3-201ENST00000620124 655 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF41Q9H4P4 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
RNF41Q9H4P4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 AL161781.1-201ENST00000354277 403 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 U3.12-201ENST00000364498 214 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 Y_RNA.302-201ENST00000364997 102 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF41Q9H4P4 RNU6-1207P-201ENST00000384343 107 ntBASIC2.94□□□□□ -1.94
RNF41Q9H4P4 MIR518C-201ENST00000384822 101 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms