Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 RNA5SP216-201ENST00000516111 123 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 RN7SKP265-201ENST00000516448 223 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 RNU6-840P-201ENST00000517275 65 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC100870.1-201ENST00000522035 505 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC087373.1-201ENST00000524920 491 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 ELOCP31-201ENST00000540463 467 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC020895.1-201ENST00000595362 272 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC068313.1-201ENST00000604028 1008 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 RPL23AP88-201ENST00000605759 454 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC006270.3-201ENST00000605967 1036 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC245297.2-201ENST00000610119 565 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC007785.2-201ENST00000598627 1916 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AP000568.1-201ENST00000282964 442 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 SNORA36C-201ENST00000384289 132 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 RPL23AP29-201ENST00000397284 453 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AL356421.1-201ENST00000403255 413 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 RNA5SP184-201ENST00000411071 108 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 Z85995.1-201ENST00000415547 335 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 NUP35P1-201ENST00000422734 947 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC019097.1-201ENST00000424783 735 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC063976.3-201ENST00000426849 329 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 UBE2V1P13-201ENST00000436983 439 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 Z73417.1-201ENST00000447373 778 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 CACYBPP2-201ENST00000453625 678 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC034159.1-201ENST00000513885 583 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 MTCO2P15-201ENST00000532655 656 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC123904.3-201ENST00000547218 814 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 NBEAP1-201ENST00000554452 979 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC013553.2-201ENST00000604244 589 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AL136363.1-201ENST00000605349 337 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC013470.4-201ENST00000619978 986 ntBASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCSER1Q9C0I3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 Y_RNA.192-201ENST00000363977 102 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RNU6-741P-201ENST00000383889 107 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RNA5SP354-201ENST00000391247 136 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 FO393413.1-201ENST00000402892 195 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RAP1BP1-201ENST00000412709 553 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RPLP0P7-201ENST00000416050 667 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AL513477.1-202ENST00000417061 214 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 HMGB1P49-201ENST00000418882 569 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RPL35AP22-201ENST00000436855 335 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 LSM1P1-201ENST00000438629 273 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 OR6K1P-201ENST00000456766 971 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 USP9YP25-201ENST00000457708 443 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 snoU13.28-201ENST00000459235 104 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AC126182.1-201ENST00000478134 357 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AC090136.1-201ENST00000520009 240 ntBASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CCSER1Q9C0I3 MIR4319-201ENST00000577285 85 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms