Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AP000432.2-201ENST00000624164 2048 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC126755.2-208ENST00000327792 462 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC138969.1-213ENST00000331436 462 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU1-62P-201ENST00000362599 164 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU4-10P-201ENST00000364383 140 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU6-335P-201ENST00000364563 113 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU1-100P-201ENST00000365255 165 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU6-1264P-201ENST00000383891 107 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU6-147P-201ENST00000383983 107 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU6-629P-201ENST00000384061 103 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU6-140P-201ENST00000384566 108 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 MIR15B-201ENST00000385045 98 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC005042.1-201ENST00000393397 800 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 MIR888-201ENST00000401186 77 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU6-710P-201ENST00000410424 105 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RN7SKP17-201ENST00000411242 351 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RPL36AP39-201ENST00000445859 318 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RN7SL372P-201ENST00000461982 298 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC007215.1-201ENST00000464893 276 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RN7SL352P-201ENST00000466002 277 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RN7SL326P-201ENST00000477493 296 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC124945.1-201ENST00000485133 188 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RN7SL655P-201ENST00000486087 298 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 PPP1R11P1-201ENST00000486095 376 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 RNU1-103P-201ENST00000516502 125 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 IGLVVII-41-1-201ENST00000518405 151 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC126615.2-201ENST00000553003 515 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC023043.3-201ENST00000593113 385 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 COX6CP7-201ENST00000597056 208 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC068768.2-201ENST00000602352 343 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AL391813.1-201ENST00000603098 260 ntBASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-1Q9BYR8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC3.09□□□□□ -1.92
KRTAP3-1Q9BYR8 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 AL034549.2-201ENST00000618285 3373 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 AL356489.2-201ENST00000566968 3528 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 RNA5SP453-201ENST00000362503 119 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 Y_RNA.24-201ENST00000362508 103 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 RNA5SP375-201ENST00000362975 119 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 RNU6-727P-201ENST00000363592 107 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 RNA5SP429-201ENST00000363688 109 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 SNORA72.4-201ENST00000384174 132 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 Y_RNA.521-201ENST00000384560 114 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 MIR526A2-201ENST00000390198 65 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 AL133270.1-201ENST00000402635 279 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 FAR2P2-201ENST00000413041 594 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 AL354868.1-201ENST00000417077 482 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 RPL21P50-201ENST00000417698 477 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 THEM7P-201ENST00000419556 672 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 YPEL5P1-201ENST00000419731 367 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 HMGN2P30-201ENST00000423237 256 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 AL161636.2-201ENST00000445179 927 ntBASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP3-1Q9BYR8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms