Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC083806.3-201ENST00000614016 455 ntBASIC1.98□□□□□ -2.09
SCAPERQ9BY12 AP001350.1-201ENST00000601906 1524 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 RNU6-342P-201ENST00000384521 104 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 RNU4-65P-201ENST00000410473 140 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 AC233728.2-201ENST00000425348 757 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 UBE2V1P13-201ENST00000436983 439 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.97□□□□□ -2.09
SCAPERQ9BY12 AP000907.2-201ENST00000530827 353 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 CYCSP26-201ENST00000534107 320 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.97□□□□□ -2.09
SCAPERQ9BY12 SETP7-201ENST00000552169 453 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.97□□□□□ -2.09
SCAPERQ9BY12 AC008749.1-201ENST00000597650 306 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.97□□□□□ -2.09
SCAPERQ9BY12 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.97□□□□□ -2.09
SCAPERQ9BY12 AL391834.1-201ENST00000609609 560 ntBASIC1.97□□□□□ -2.09
SCAPERQ9BY12 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 RNU6-335P-201ENST00000364563 113 ntBASIC1.96□□□□□ -2.1
SCAPERQ9BY12 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
SCAPERQ9BY12 snoU13.3-201ENST00000459441 104 ntBASIC1.96□□□□□ -2.1
SCAPERQ9BY12 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 AC068135.2-201ENST00000569293 1028 ntBASIC1.96□□□□□ -2.1
SCAPERQ9BY12 MTATP6P3-201ENST00000581686 676 ntBASIC1.96□□□□□ -2.1
SCAPERQ9BY12 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 AL162373.1-201ENST00000620433 407 ntBASIC1.96□□□□□ -2.1
SCAPERQ9BY12 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SCAPERQ9BY12 CDC27P3-201ENST00000635418 1910 ntBASIC1.96□□□□□ -2.1
SCAPERQ9BY12 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
SCAPERQ9BY12 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
SCAPERQ9BY12 MIR548J-201ENST00000408833 112 ntBASIC1.95□□□□□ -2.1
SCAPERQ9BY12 AC074117.2-201ENST00000417130 397 ntBASIC1.95□□□□□ -2.1
SCAPERQ9BY12 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.95□□□□□ -2.1
SCAPERQ9BY12 MTATP6P4-201ENST00000427725 675 ntBASIC1.95□□□□□ -2.1
SCAPERQ9BY12 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SCAPERQ9BY12 AL513343.1-201ENST00000451818 792 ntBASIC1.95□□□□□ -2.1
SCAPERQ9BY12 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.95□□□□□ -2.1
SCAPERQ9BY12 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.95□□□□□ -2.1
SCAPERQ9BY12 CBX3P2-202ENST00000583365 535 ntBASIC1.95□□□□□ -2.1
SCAPERQ9BY12 AC097504.2-201ENST00000608088 454 ntBASIC1.95□□□□□ -2.1
SCAPERQ9BY12 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.95□□□□□ -2.1
SCAPERQ9BY12 MIR4496-201ENST00000635896 61 ntBASIC1.95□□□□□ -2.1
SCAPERQ9BY12 RNU6-203P-201ENST00000384038 104 ntBASIC1.94□□□□□ -2.1
SCAPERQ9BY12 AC096632.1-201ENST00000427395 310 ntBASIC1.94□□□□□ -2.1
SCAPERQ9BY12 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 AC105252.1-201ENST00000503089 286 ntBASIC1.94□□□□□ -2.1
SCAPERQ9BY12 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 RN7SKP49-201ENST00000516675 260 ntBASIC1.94□□□□□ -2.1
SCAPERQ9BY12 RNA5SP468-201ENST00000516782 93 ntBASIC1.94□□□□□ -2.1
SCAPERQ9BY12 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 AC069304.3-201ENST00000603938 1084 ntBASIC1.94□□□□□ -2.1
SCAPERQ9BY12 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.94□□□□□ -2.1
SCAPERQ9BY12 AC130650.2-201ENST00000618736 2403 ntBASIC1.93□□□□□ -2.1
SCAPERQ9BY12 SNORA81-201ENST00000408493 178 ntBASIC1.93□□□□□ -2.1
SCAPERQ9BY12 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.93□□□□□ -2.1
SCAPERQ9BY12 AC023347.2-201ENST00000433994 462 ntBASIC1.93□□□□□ -2.1
SCAPERQ9BY12 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.93□□□□□ -2.1
SCAPERQ9BY12 SNRPEP4-201ENST00000435815 279 ntBASIC1.93□□□□□ -2.1
SCAPERQ9BY12 FO393415.2-201ENST00000480085 343 ntBASIC1.93□□□□□ -2.1
SCAPERQ9BY12 RPS15AP34-201ENST00000487776 387 ntBASIC1.93□□□□□ -2.1
SCAPERQ9BY12 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.93□□□□□ -2.1
SCAPERQ9BY12 AC025768.1-201ENST00000510057 267 ntBASIC1.93□□□□□ -2.1
SCAPERQ9BY12 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.93□□□□□ -2.1
SCAPERQ9BY12 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.93□□□□□ -2.1
SCAPERQ9BY12 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SCAPERQ9BY12 RNU6-50P-201ENST00000362356 103 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 RNU6-997P-201ENST00000384725 107 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 MIR598-201ENST00000384868 97 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AL627224.1-201ENST00000448334 444 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 TPMTP4-201ENST00000450749 678 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.92□□□□□ -2.1
SCAPERQ9BY12 RNU7-27P-201ENST00000459281 62 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AP002371.1-201ENST00000463604 433 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AC087879.1-201ENST00000474343 374 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AC023790.1-201ENST00000482174 347 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.92□□□□□ -2.1
SCAPERQ9BY12 FABP5P5-201ENST00000515537 406 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AC109635.4-202ENST00000531666 412 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 AC073413.2-201ENST00000604332 360 ntBASIC1.92□□□□□ -2.1
SCAPERQ9BY12 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.92□□□□□ -2.1
SCAPERQ9BY12 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.92□□□□□ -2.1
SCAPERQ9BY12 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 RNU6-1032P-201ENST00000384100 107 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 MIR222-201ENST00000384992 110 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 RNA5SP61-201ENST00000516453 100 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC022634.1-201ENST00000520765 532 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms