Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU6-528P-201ENST00000516926 100 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-201P-201ENST00000517100 61 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC022878.1-201ENST00000530684 149 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 HSPE1P20-201ENST00000538133 289 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RSL24D1P11-201ENST00000591045 491 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AL359999.1-201ENST00000604513 294 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC239868.4-201ENST00000608318 671 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC090115.4-201ENST00000609970 188 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC138749.5-201ENST00000611461 208 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC116165.2-201ENST00000616705 206 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC104010.1-201ENST00000616889 150 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC108479.2-201ENST00000617314 601 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC090582.1-201ENST00000636321 199 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 RPL9P7-201ENST00000330965 580 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-50P-201ENST00000362356 103 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-623P-201ENST00000363143 105 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-809P-201ENST00000384461 107 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.598-201ENST00000410480 95 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC016907.1-201ENST00000419483 435 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AL121871.1-201ENST00000443413 436 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 MTCO2P7-201ENST00000446518 666 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 USP9YP12-201ENST00000450481 570 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AL590365.1-201ENST00000450788 243 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 SSXP1-201ENST00000453640 473 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC027673.1-201ENST00000456245 405 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC109925.1-201ENST00000478069 331 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 RPS29P2-201ENST00000479278 136 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 RPL23AP41-201ENST00000484754 458 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 CBX3P3-201ENST00000508108 532 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 MTCO3P7-201ENST00000510008 774 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 MTND4LP31-201ENST00000514859 294 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC126177.3-201ENST00000551839 688 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC005771.1-201ENST00000585581 349 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 UBE2L4-201ENST00000587688 464 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 DUXAP4-201ENST00000603046 613 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 XIAPP1-201ENST00000603162 600 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 RPL23AP88-201ENST00000605759 454 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC024941.1-201ENST00000612250 334 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AL110115.1-201ENST00000614396 364 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AL158801.5-201ENST00000623123 465 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC018692.3-201ENST00000623929 123 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC139792.2-201ENST00000624218 587 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 AC092125.1-201ENST00000562568 1995 ntBASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC28BQ9BUN5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 RNU1-35P-201ENST00000362782 153 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 SNORA25.6-201ENST00000364121 118 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.318-201ENST00000365131 97 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-629P-201ENST00000384061 103 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.548-201ENST00000384656 105 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 U3.42-201ENST00000408746 214 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.608-201ENST00000410647 95 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL096701.2-201ENST00000416920 238 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL353777.1-201ENST00000425552 326 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL356583.2-201ENST00000426536 280 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 MTCO3P5-201ENST00000433620 714 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL353706.1-201ENST00000436728 494 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 H2AFZP6-201ENST00000444403 394 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL133547.1-201ENST00000448546 220 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC104472.2-201ENST00000469035 601 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC082651.2-201ENST00000496833 166 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms