Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 TRAV28-201ENST00000557548 323 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC234778.2-201ENST00000566241 354 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 AC002550.2-201ENST00000621246 394 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 CCT4P2-201ENST00000233836 1548 ntBASIC1.75□□□□□ -2.13
UPK3BQ9BT76 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
UPK3BQ9BT76 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 RNU4-82P-201ENST00000362443 140 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 UBE2V1P13-201ENST00000436983 439 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 MTND4P6-201ENST00000438297 472 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 Z82210.1-201ENST00000440037 231 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 BNIP3P2-201ENST00000441221 577 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 MTCYBP42-201ENST00000444653 1130 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 CBWD4P-201ENST00000445695 655 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 snoU13.8-201ENST00000458890 104 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 RPS20P20-201ENST00000460498 340 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 EIF4EP3-201ENST00000498782 656 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC093801.2-201ENST00000503966 1050 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC118465.1-201ENST00000513820 1271 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC093677.1-201ENST00000514414 678 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 RN7SKP24-201ENST00000515888 284 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 RNA5SP148-201ENST00000516527 94 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 RNA5SP291-201ENST00000517222 105 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AP003355.1-201ENST00000518956 587 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 UBTFL10-201ENST00000528532 562 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC087894.1-201ENST00000538359 518 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC087465.1-201ENST00000560574 245 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 MIR4435-1-201ENST00000582552 80 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC007621.1-201ENST00000604544 437 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 AC103710.4-201ENST00000609301 899 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 MIR6840-201ENST00000611937 71 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.74□□□□□ -2.13
UPK3BQ9BT76 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
UPK3BQ9BT76 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 ZNF658B-202ENST00000615961 3375 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 MIR449A-201ENST00000362113 91 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 RNU5E-8P-201ENST00000363502 116 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 RNA5SP456-201ENST00000364002 114 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 RNU6-741P-201ENST00000383889 107 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 SNORA6-201ENST00000384033 151 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 RNU6-217P-201ENST00000384164 104 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 SNORA11.2-201ENST00000408318 127 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 MORF4L1P6-201ENST00000418771 268 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 USP9YP20-201ENST00000419224 558 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 Z80107.1-201ENST00000436830 412 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 MTND2P20-201ENST00000440805 661 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 OR10R1P-201ENST00000441524 1141 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 RPL7P36-201ENST00000444633 681 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 AC104389.3-201ENST00000445629 235 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 AL031659.1-201ENST00000447075 539 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.73□□□□□ -2.13
UPK3BQ9BT76 MRPS17P3-201ENST00000465453 385 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 SRIP1-201ENST00000489235 288 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 HMGB1P28-201ENST00000507778 552 ntBASIC1.73□□□□□ -2.13
UPK3BQ9BT76 AC114786.4-201ENST00000508771 728 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms