Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RNU6-390P-201ENST00000516259 103 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RN7SKP277-201ENST00000516895 283 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 IGKV2D-36-201ENST00000518643 226 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 AP006587.4-201ENST00000526053 529 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 OR5D17P-201ENST00000531492 978 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 HSPA8P4-201ENST00000511877 1920 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 Y_RNA.577-201ENST00000384794 101 ntBASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 IFNWP4-201ENST00000453148 294 ntBASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 AC133473.1-201ENST00000455173 299 ntBASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 AC087385.1-201ENST00000475062 312 ntBASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 RPL17P19-201ENST00000489069 552 ntBASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 Y_RNA.719-201ENST00000517156 106 ntBASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 AC109446.1-201ENST00000566172 220 ntBASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC85AQ96PX6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.84□□□□□ -1.48
CCDC85AQ96PX6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC85AQ96PX6 AC233263.6-201ENST00000631132 1963 ntBASIC5.84□□□□□ -1.48
CCDC85AQ96PX6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC85AQ96PX6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 RNU6-1062P-201ENST00000383908 107 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 Y_RNA.526-201ENST00000384572 110 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AL590762.2-201ENST00000395798 571 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AC110754.1-201ENST00000399740 601 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AL590704.1-201ENST00000402856 794 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AC099677.1-201ENST00000420575 175 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 SNORD127-201ENST00000458892 86 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 RPL36AP41-201ENST00000493820 306 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AC083829.1-201ENST00000503756 657 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 RN7SKP60-201ENST00000516985 239 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AP000889.1-201ENST00000530968 660 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AC012119.1-201ENST00000603184 222 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 IGHV3-29-201ENST00000604817 344 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 U3.53-201ENST00000628922 216 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 MIR4272-201ENST00000635924 64 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 PABPC1P7-201ENST00000413177 1513 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AC010615.1-201ENST00000594254 1764 ntBASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC85AQ96PX6 AL136164.3-201ENST00000624429 3978 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RAD17P1-201ENST00000418130 2042 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC021146.4-201ENST00000309229 279 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 OR56A5-201ENST00000340110 738 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RNU6-596P-201ENST00000365395 98 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RN7SKP267-201ENST00000410381 285 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AL137014.1-201ENST00000420490 1226 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AL391219.1-201ENST00000422570 483 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RPL7AP25-201ENST00000423357 805 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 HMGB1P9-201ENST00000429856 646 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 ELOCP18-201ENST00000434209 337 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RPL21P2-201ENST00000440049 481 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 GEMIN8P3-201ENST00000445417 720 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 PCMTD1P1-201ENST00000455560 355 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RNU7-187P-201ENST00000458985 68 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RPL21P126-201ENST00000470049 478 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC108860.1-201ENST00000484521 383 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 VN1R105P-201ENST00000486595 910 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 IGLVIV-65-201ENST00000517313 360 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AP003385.6-201ENST00000531603 374 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC006349.1-201ENST00000555526 235 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 ATP5J2P6-201ENST00000565203 266 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC084783.1-201ENST00000565846 910 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AC067852.3-201ENST00000589177 561 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.82□□□□□ -1.48
CCDC85AQ96PX6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms