Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC006557.5-201ENST00000603126 811 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 MIR98-201ENST00000606724 119 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC073308.1-201ENST00000623696 305 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 MTND5P42-201ENST00000637720 498 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RNA5SP42-201ENST00000364278 115 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RNU6-512P-201ENST00000364438 103 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 Y_RNA.359-201ENST00000365498 102 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RNU6-198P-201ENST00000384258 104 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RPL26P29-201ENST00000415623 438 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 HMGB3P20-201ENST00000417997 600 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 ISCA1P1-201ENST00000426679 387 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RPL36AP6-201ENST00000435770 321 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 MTND4P25-201ENST00000441039 533 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RPS24P13-201ENST00000442520 397 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 DDX3P2-201ENST00000446138 111 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC093392.2-201ENST00000450682 337 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RPL39P36-201ENST00000490784 156 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 FCF1P3-201ENST00000496394 590 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RAC1P2-201ENST00000511164 579 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 MTCO3P28-201ENST00000513351 515 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 MTCO2P4-201ENST00000517968 247 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 NCAPGP2-201ENST00000557911 754 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AL136363.1-201ENST00000605349 337 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC098614.4-201ENST00000607601 462 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC008498.1-201ENST00000613012 531 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 MIR8059-201ENST00000620427 81 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 AC092656.1-203ENST00000624134 423 ntBASIC3.23□□□□□ -1.89
CMTM3Q96MX0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CMTM3Q96MX0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AL359693.1-201ENST00000614959 2407 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNU6-288P-201ENST00000363690 104 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNA5SP509-201ENST00000364577 119 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNU2-39P-201ENST00000410604 198 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNA5SP31-201ENST00000411144 127 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 ELOCP19-201ENST00000411919 318 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RPS12P24-201ENST00000412619 387 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 GPM6BP2-201ENST00000432046 144 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 MTCO3P5-201ENST00000433620 714 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 SNRPEP9-201ENST00000436794 238 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AL714022.1-201ENST00000439897 151 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 GPM6BP1-201ENST00000446387 144 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RPS3AP46-201ENST00000448352 682 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 CECR9-201ENST00000453421 199 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 FABP5P15-201ENST00000453566 214 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RPS29P33-201ENST00000456717 146 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC092798.1-201ENST00000458542 409 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC011276.1-201ENST00000469688 323 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 ARL4AP2-201ENST00000507378 601 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 SCARNA24.1-201ENST00000516465 137 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNU6-579P-201ENST00000516879 102 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNU6-677P-201ENST00000516914 101 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 RNU6-430P-201ENST00000517078 107 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AP003072.2-201ENST00000527756 676 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 TRAV37-201ENST00000553906 342 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms