Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC007115.1-201ENST00000546853 234 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC010928.2-201ENST00000588017 287 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC091925.1-201ENST00000623204 462 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 RNU4-31P-201ENST00000384211 141 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 IPO7P1-201ENST00000442031 636 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AL136380.1-201ENST00000447970 162 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 RPL21P39-201ENST00000463605 483 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC146507.1-201ENST00000468335 354 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.01□□□□□ -2.25
SPG11Q96JI7 BNIP3P26-201ENST00000600827 554 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AL445493.3-201ENST00000619568 477 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC090617.7-201ENST00000623952 126 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SPG11Q96JI7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SPG11Q96JI7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SPG11Q96JI7 AP002907.1-201ENST00000606361 1430 ntBASIC1.01□□□□□ -2.25
SPG11Q96JI7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.01□□□□□ -2.25
SPG11Q96JI7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SPG11Q96JI7 CR382285.2-201ENST00000624662 1495 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 RNU6-72P-201ENST00000384285 79 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 XIST-201ENST00000416330 750 ntTSL 2 BASIC1□□□□□ -2.25
SPG11Q96JI7 AC244035.1-201ENST00000430042 390 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1□□□□□ -2.25
SPG11Q96JI7 RPS27AP10-201ENST00000496103 208 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 SEM1P1-201ENST00000506694 209 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1□□□□□ -2.25
SPG11Q96JI7 CYCSP23-201ENST00000519781 313 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1□□□□□ -2.25
SPG11Q96JI7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1□□□□□ -2.25
SPG11Q96JI7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1□□□□□ -2.25
SPG11Q96JI7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1□□□□□ -2.25
SPG11Q96JI7 MIR4446-201ENST00000578505 67 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 RNA5SP295-201ENST00000362655 121 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 AC109780.2-201ENST00000413467 845 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 CR848007.2-201ENST00000424918 787 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 AC234064.1-201ENST00000436312 247 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 SNRPGP13-201ENST00000442212 177 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1□□□□□ -2.25
SPG11Q96JI7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1□□□□□ -2.25
SPG11Q96JI7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1□□□□□ -2.25
SPG11Q96JI7 MTND4LP24-201ENST00000572277 291 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1□□□□□ -2.25
SPG11Q96JI7 AC123912.5-201ENST00000605470 343 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 C2orf27A-204ENST00000623058 969 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 AC004808.1-201ENST00000627671 721 ntBASIC1□□□□□ -2.25
SPG11Q96JI7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1□□□□□ -2.25
SPG11Q96JI7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
SPG11Q96JI7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC111188.2-201ENST00000529697 1387 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 RNU1-78P-201ENST00000391248 165 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 RPL37P25-201ENST00000507308 276 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC121758.2-201ENST00000553271 193 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.99□□□□□ -2.25
SPG11Q96JI7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.99□□□□□ -2.25
SPG11Q96JI7 DUXAP9-208ENST00000622815 614 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.99□□□□□ -2.25
SPG11Q96JI7 LINC01347-201ENST00000417964 355 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 SNRPEP10-201ENST00000420249 274 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 GTF2IP12-201ENST00000456547 356 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 MTCYBP37-201ENST00000510642 1133 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC103833.1-201ENST00000517442 172 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 FAM157A-202ENST00000615155 405 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC002550.2-201ENST00000621246 394 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 AC100821.1-201ENST00000523153 2479 ntBASIC0.99□□□□□ -2.25
SPG11Q96JI7 OR5AQ1P-203ENST00000641818 1529 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 RNA5SP393-201ENST00000363423 117 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.98□□□□□ -2.25
SPG11Q96JI7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.98□□□□□ -2.25
SPG11Q96JI7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.98□□□□□ -2.25
SPG11Q96JI7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.98□□□□□ -2.25
SPG11Q96JI7 uc_338.20-201ENST00000621563 178 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.98□□□□□ -2.25
SPG11Q96JI7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SPG11Q96JI7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SPG11Q96JI7 AC103710.2-202ENST00000641454 2853 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 RNY4P3-201ENST00000365254 95 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.98□□□□□ -2.25
SPG11Q96JI7 AC004941.2-201ENST00000427009 228 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 RPL7P18-201ENST00000478965 734 ntBASIC0.98□□□□□ -2.25
SPG11Q96JI7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SPG11Q96JI7 AL354685.2-201ENST00000448218 1447 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 Y_RNA.142-201ENST00000363491 102 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 SNORA2A-201ENST00000383885 135 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 RNU6-30P-201ENST00000384561 107 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 RNA5SP465-201ENST00000391195 109 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 ANAPC10P1-201ENST00000395991 556 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.97□□□□□ -2.25
SPG11Q96JI7 RNA5SP285-201ENST00000516619 119 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 PABPC1P7-201ENST00000413177 1513 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 RNU6-418P-201ENST00000384035 107 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 RNU11-5P-201ENST00000391216 129 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 HMGB1P13-201ENST00000406019 642 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 RPL30P4-201ENST00000429309 333 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms