Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNA5SP515-201ENST00000364570 118 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 RNA5SP479-201ENST00000364858 117 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-76P-201ENST00000384060 104 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-483P-201ENST00000384088 108 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-74P-201ENST00000384235 107 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 Y_RNA.481-201ENST00000384373 102 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 SNORA57.1-201ENST00000391227 145 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 MIR1277-201ENST00000408536 78 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 SNORA57.3-201ENST00000411095 141 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 MTCO1P20-201ENST00000425366 358 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 MTND1P2-201ENST00000430604 821 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 RPL7P54-201ENST00000438336 674 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 HMGB3P12-201ENST00000438745 556 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 RBMX2P4-201ENST00000441256 376 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC010631.1-201ENST00000474150 156 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 MTAPP1-201ENST00000489154 819 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC100870.1-201ENST00000522035 505 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AL512310.1-201ENST00000548639 172 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AL157687.1-201ENST00000554853 619 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AL121992.2-201ENST00000606262 256 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AP002360.4-201ENST00000606980 481 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AP001330.5-201ENST00000607176 411 ntBASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP3Q96JB5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AL353746.1-201ENST00000566293 6881 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 Y_RNA.22-201ENST00000362492 102 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RNA5SP322-201ENST00000363617 119 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-1284P-201ENST00000363701 100 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RNU5E-6P-201ENST00000365574 115 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC110754.1-201ENST00000399740 601 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 TXNP7-201ENST00000406296 293 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 MED13P1-201ENST00000428342 171 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 NEK4P1-201ENST00000433383 879 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 SNORD97-201ENST00000459187 142 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 FAM92A1P2-202ENST00000504766 877 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC026427.2-201ENST00000506228 536 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RN7SKP83-201ENST00000516512 178 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 SNORA31.22-201ENST00000517204 135 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-840P-201ENST00000517275 65 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC109635.3-201ENST00000529536 185 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 RPS3AP4-201ENST00000555161 764 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC068135.2-201ENST00000569293 1028 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC006504.3-201ENST00000586818 523 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AP000907.4-201ENST00000604143 237 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 HMGB1P50-201ENST00000605814 607 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC004696.1-201ENST00000614345 607 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 FRG1KP-201ENST00000623592 341 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 MIR4275-201ENST00000636486 87 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC009812.4-201ENST00000569134 1805 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 ZNF680P1-201ENST00000436625 1469 ntBASIC4.18□□□□□ -1.74
CDK5RAP3Q96JB5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AL021368.2-201ENST00000606125 5352 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms