Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 Y_RNA.255-201ENST00000364581 97 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 Y_RNA.419-201ENST00000384041 102 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RNU2-9P-201ENST00000410194 145 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RNU2-71P-201ENST00000411395 189 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC004552.1-201ENST00000419089 348 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AL353678.1-201ENST00000422735 741 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 ATP5HP2-201ENST00000433885 485 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC119618.1-201ENST00000434191 222 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 HLA-N-201ENST00000437516 135 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 CYCSP43-201ENST00000438233 310 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 DDX3P2-201ENST00000446138 111 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RPL7P12-201ENST00000446719 750 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 snoU13.24-201ENST00000458998 104 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 HMGN2P26-201ENST00000463169 339 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RPS26P3-201ENST00000470205 348 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC090543.2-201ENST00000483963 348 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC004057.1-201ENST00000485827 348 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 HSPD1P15-201ENST00000505573 1122 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC103851.1-201ENST00000506833 274 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RNU7-143P-201ENST00000516781 65 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RNU7-30P-201ENST00000516835 62 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 RNU6-410P-201ENST00000517006 107 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC107953.1-201ENST00000522216 297 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC087241.2-201ENST00000535801 324 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC105224.1-201ENST00000587055 421 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC010591.1-201ENST00000603941 649 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 uc_338.12-201ENST00000616344 181 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 MIR1302-1-201ENST00000637932 143 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC100810.6-201ENST00000638068 285 ntBASIC4.39□□□□□ -1.71
PGBD4Q96DM1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PGBD4Q96DM1 AC009902.3-201ENST00000606235 2172 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 RNA5SP52-201ENST00000362448 134 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 CYP4F29P-201ENST00000420685 446 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AL645937.1-202ENST00000421799 937 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 RPL35AP12-201ENST00000425362 338 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 RPL21P66-201ENST00000426566 466 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 KCTD9P3-201ENST00000434597 1169 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 BNIP3P2-201ENST00000441221 577 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 RPS24P6-201ENST00000452670 400 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 HMGN2P7-201ENST00000456186 273 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC004062.1-201ENST00000509926 645 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC021146.1-201ENST00000511202 716 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 SNORA67.7-201ENST00000516664 135 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 RNU6-1073P-201ENST00000517182 106 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 PSMA2P1-201ENST00000526365 646 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 ZNF192P1-203ENST00000565888 810 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 CYP4A43P-201ENST00000568156 121 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC113139.1-201ENST00000605049 239 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AL162730.1-201ENST00000605734 292 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AL031666.3-201ENST00000609320 1006 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AC006133.1-201ENST00000617106 264 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 AL354798.1-201ENST00000622505 329 ntBASIC4.38□□□□□ -1.71
PGBD4Q96DM1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PGBD4Q96DM1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms