Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TOPBP1Q92547 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC107954.1-201ENST00000565906 727 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 CDC27P3-201ENST00000635418 1910 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TOPBP1Q92547 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.26□□□□□ -2.05
TOPBP1Q92547 RNU6-1243P-201ENST00000364028 107 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TOPBP1Q92547 RNU6-152P-201ENST00000384037 107 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.26□□□□□ -2.05
TOPBP1Q92547 MTND1P18-201ENST00000448191 573 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 AC104472.2-201ENST00000469035 601 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.26□□□□□ -2.05
TOPBP1Q92547 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.26□□□□□ -2.05
TOPBP1Q92547 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TOPBP1Q92547 RNU6-889P-201ENST00000517189 103 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 AP004371.1-201ENST00000525240 214 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.26□□□□□ -2.05
TOPBP1Q92547 FAM106DP-201ENST00000586416 501 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 AL137246.1-201ENST00000607072 977 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.26□□□□□ -2.05
TOPBP1Q92547 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.26□□□□□ -2.05
TOPBP1Q92547 ZNF37BP-203ENST00000452306 1352 ntBASIC2.26□□□□□ -2.05
TOPBP1Q92547 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
TOPBP1Q92547 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.25□□□□□ -2.05
TOPBP1Q92547 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.25□□□□□ -2.05
TOPBP1Q92547 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TOPBP1Q92547 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.25□□□□□ -2.05
TOPBP1Q92547 HMGB1P22-201ENST00000505315 124 ntBASIC2.25□□□□□ -2.05
TOPBP1Q92547 AC096571.1-202ENST00000506634 735 ntBASIC2.25□□□□□ -2.05
TOPBP1Q92547 AC016065.2-201ENST00000514530 444 ntBASIC2.25□□□□□ -2.05
TOPBP1Q92547 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.25□□□□□ -2.05
TOPBP1Q92547 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.25□□□□□ -2.05
TOPBP1Q92547 RPL21P5-201ENST00000554662 472 ntBASIC2.25□□□□□ -2.05
TOPBP1Q92547 HSPE1P3-201ENST00000559254 309 ntBASIC2.25□□□□□ -2.05
TOPBP1Q92547 DUXAP4-201ENST00000603046 613 ntBASIC2.25□□□□□ -2.05
TOPBP1Q92547 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
TOPBP1Q92547 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TOPBP1Q92547 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
TOPBP1Q92547 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TOPBP1Q92547 RNU6-1032P-201ENST00000384100 107 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 MIR625-201ENST00000385047 85 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 AL591034.1-201ENST00000407447 340 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 AL121578.1-201ENST00000428051 892 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 FABP5P3-201ENST00000437960 408 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 RPS24P6-201ENST00000452670 400 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 AC004062.1-201ENST00000509926 645 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 AP003033.1-201ENST00000527244 415 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 MTCO3P24-201ENST00000572729 782 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 AC025016.1-201ENST00000616746 682 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.24□□□□□ -2.05
TOPBP1Q92547 AC020923.1-201ENST00000624021 917 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 AC073055.1-201ENST00000456901 1621 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 AL136520.1-201ENST00000600311 1322 ntBASIC2.24□□□□□ -2.05
TOPBP1Q92547 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
TOPBP1Q92547 MIR548J-201ENST00000408833 112 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 RPS15AP7-201ENST00000439294 405 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 RABEPKP1-201ENST00000440529 1026 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 RAD1P2-201ENST00000446414 663 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 RPL21P131-201ENST00000497298 483 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 MTCO3P42-201ENST00000509488 518 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC093770.1-201ENST00000511559 571 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 MTCO3P39-201ENST00000514812 518 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 RNU6-711P-201ENST00000517255 106 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AP005435.4-201ENST00000529514 284 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 ACTR3BP3-201ENST00000565577 979 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 MIR4504-201ENST00000577413 92 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC011712.1-201ENST00000588959 234 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC091057.2-201ENST00000602594 792 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC006329.2-201ENST00000611491 394 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AL390240.1-201ENST00000612950 384 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 AC068831.7-201ENST00000616954 363 ntBASIC2.23□□□□□ -2.05
TOPBP1Q92547 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
TOPBP1Q92547 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
TOPBP1Q92547 RPS12P24-201ENST00000412619 387 ntBASIC2.22□□□□□ -2.05
TOPBP1Q92547 AC109780.2-201ENST00000413467 845 ntBASIC2.22□□□□□ -2.05
TOPBP1Q92547 HMGN1P33-201ENST00000432945 451 ntBASIC2.22□□□□□ -2.05
TOPBP1Q92547 MTCO2P9-201ENST00000503214 694 ntBASIC2.22□□□□□ -2.05
TOPBP1Q92547 Y_RNA.675-201ENST00000516389 149 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms