Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSH3Q8TE77 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSH3Q8TE77 SNORA31-201ENST00000362607 130 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 SNORD56.2-201ENST00000363242 71 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 RNY3P3-201ENST00000363816 102 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 SNORA7.2-201ENST00000364446 145 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 MT-TD-201ENST00000387419 68 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 RPL31P1-201ENST00000398116 372 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 MTATP6P18-201ENST00000417994 673 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 AL035410.1-201ENST00000427409 427 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AL159987.2-201ENST00000432754 307 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 AL049734.2-201ENST00000441066 616 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 PMCHL2-203ENST00000457791 237 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC008155.2-201ENST00000464337 397 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC093767.1-201ENST00000504523 156 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC026784.1-201ENST00000507986 352 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.28□□□□□ -1.72
SSH3Q8TE77 MIR3167-201ENST00000579623 85 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AL355472.4-201ENST00000610233 626 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC010133.1-201ENST00000615809 842 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC007742.2-201ENST00000618226 398 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC010338.1-201ENST00000621823 717 ntBASIC4.28□□□□□ -1.72
SSH3Q8TE77 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSH3Q8TE77 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSH3Q8TE77 AC058791.1-201ENST00000608412 3198 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSH3Q8TE77 RNU6-451P-201ENST00000362921 107 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 RNU6-335P-201ENST00000364563 113 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 Y_RNA.263-201ENST00000364659 114 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 Y_RNA.493-201ENST00000384422 102 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 MIR183-201ENST00000384958 110 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 RPS4XP8-201ENST00000402039 771 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC093578.1-201ENST00000415219 368 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 AL590233.1-201ENST00000430017 456 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 GTF2IP20-201ENST00000431663 360 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 HMGB3P12-201ENST00000438745 556 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 USP9YP15-201ENST00000442391 422 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 HMGB1P15-201ENST00000453854 435 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC010587.1-201ENST00000505809 469 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 LRRC34P2-201ENST00000514850 553 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 IGKV2D-36-201ENST00000518643 226 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC107934.1-201ENST00000522215 217 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 AL356432.3-201ENST00000568952 465 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 SNRPGP15-201ENST00000600149 222 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC007687.1-201ENST00000602704 304 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC087045.1-201ENST00000605856 382 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 uc_338.32-201ENST00000615087 172 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SSH3Q8TE77 MTND4P23-201ENST00000447723 1363 ntBASIC4.27□□□□□ -1.73
SSH3Q8TE77 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSH3Q8TE77 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSH3Q8TE77 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSH3Q8TE77 SNORA51.2-201ENST00000364595 132 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 SNORA20.2-201ENST00000383922 131 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 RNU6-456P-201ENST00000384493 107 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 RNU6-878P-201ENST00000384578 110 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 RNA5SP171-201ENST00000391071 115 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC068050.1-201ENST00000394891 380 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 AL513185.2-201ENST00000425543 193 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 SNRPGP6-201ENST00000451124 220 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC083798.1-201ENST00000472671 131 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 RPL21P13-201ENST00000488305 481 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 RPL39P36-201ENST00000490784 156 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC093663.1-201ENST00000497190 394 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 AP003072.2-201ENST00000527756 676 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC123904.3-201ENST00000547218 814 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC025946.2-201ENST00000603398 234 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 BNIP3P10-201ENST00000605360 577 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.26□□□□□ -1.73
SSH3Q8TE77 RMST_3.1-201ENST00000611651 109 ntBASIC4.26□□□□□ -1.73
SSH3Q8TE77 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms