Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 PARP1P2-201ENST00000556806 195 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 AC239868.2-201ENST00000564237 4527 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 MIR7853-201ENST00000584820 132 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 AP001029.2-203ENST00000589795 4910 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 AL670379.2-201ENST00000604983 252 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 AC083809.1-201ENST00000615051 472 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 AC110801.1-201ENST00000623590 212 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 Z99571.1-201ENST00000636677 394 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-701P-201ENST00000384059 107 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AC119751.6-201ENST00000416712 186 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 RPS23P7-201ENST00000466210 444 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 HMGB1P25-201ENST00000468402 607 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AC016065.2-201ENST00000514530 444 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-1333P-201ENST00000516162 93 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-426P-201ENST00000516464 97 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 ATP5J2P6-201ENST00000565203 266 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AL008718.3-201ENST00000610217 321 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 RNA5SP439-201ENST00000617595 124 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AC087385.3-201ENST00000620477 187 ntBASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NKX2-3Q8TAU0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 MAPK10-338ENST00000641647 3362 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 SNORD82-201ENST00000365530 70 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 OR1L6-202ENST00000373684 1044 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 MIR190B-201ENST00000401119 79 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 AC068287.1-201ENST00000430283 295 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 HSPD1P21-201ENST00000436541 245 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 GAPDHP27-201ENST00000447427 1020 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 AC079168.2-201ENST00000453977 416 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 RPL23AP65-201ENST00000475608 468 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-1012P-201ENST00000516606 109 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 AP000859.1-201ENST00000525536 307 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 MIR5692A1-201ENST00000580523 69 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 MIR4308-201ENST00000580634 81 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 AC209154.1-201ENST00000582156 337 ntBASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX2-3Q8TAU0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SNURFL-201ENST00000309296 343 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SNORD116-14-201ENST00000383894 92 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SNORD116-17-201ENST00000383929 92 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-637P-201ENST00000384050 107 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SNORD116-15-201ENST00000384445 92 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SNORD116-20-201ENST00000384529 92 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SNORD116-19-201ENST00000384729 92 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 MIR600-201ENST00000385007 98 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 U3.32-201ENST00000408116 212 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 RPL21P41-201ENST00000459863 264 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 AC097484.1-201ENST00000471148 389 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 CYCTP-201ENST00000504253 315 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 RNU4-57P-201ENST00000515980 135 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms