Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ANP32BP2-201ENST00000454525 545 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AL445433.1-201ENST00000457507 257 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 RN7SL188P-201ENST00000469842 285 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AC122688.1-201ENST00000541494 223 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 MIR4776-2-201ENST00000580204 80 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AC023575.1-201ENST00000580510 358 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AC009779.6-201ENST00000603972 165 ntBASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DEPDC4Q8N2C3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 LINC01109-201ENST00000603837 3081 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP477-201ENST00000362639 119 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 SNORD81.1-201ENST00000363064 77 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 RNU6-708P-201ENST00000384217 107 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 RNY3P4-201ENST00000384428 101 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 SNORD115-46-201ENST00000390982 71 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 SNORD58.1-201ENST00000391313 66 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC005042.1-201ENST00000393397 800 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 C4BPAP2-201ENST00000428434 478 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 BX679664.1-201ENST00000434429 253 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC073465.2-201ENST00000440938 498 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC092798.1-201ENST00000458542 409 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 snoU13.4-201ENST00000458916 104 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 HMGB3P17-201ENST00000504195 649 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 SNORA31.8-201ENST00000516327 108 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 RNU5B-3P-201ENST00000516601 115 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC022080.3-201ENST00000544433 482 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 EDDM3DP-201ENST00000554692 434 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AC127024.6-201ENST00000621598 424 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 AL136228.1-201ENST00000622221 319 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 SCARNA4-202ENST00000625402 129 ntBASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.2□□□□□ -1.58
DEPDC4Q8N2C3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 SELENOWP1-201ENST00000322792 252 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RNU5E-7P-201ENST00000365290 117 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RPL21P75-201ENST00000396599 483 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RPL21P28-201ENST00000401418 483 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RNU2-68P-201ENST00000410878 191 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AL590556.1-201ENST00000423231 483 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC098614.2-201ENST00000426040 255 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC007560.1-201ENST00000426912 237 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC007919.1-201ENST00000429380 217 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AL513124.1-201ENST00000450410 614 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RPL21P11-201ENST00000461458 483 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RPL21P39-201ENST00000463605 483 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC087190.1-201ENST00000484462 480 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC107032.1-201ENST00000485945 480 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC132942.1-201ENST00000486753 483 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 COX6B1P2-201ENST00000489624 230 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC093591.1-201ENST00000491435 481 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RN7SL193P-201ENST00000491708 276 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RPL21P16-201ENST00000495531 483 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms