Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 MIR4737-201ENST00000583979 81 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC010900.2-201ENST00000604508 210 ntBASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF135Q8IUD6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AL031595.2-201ENST00000624215 19071 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC092681.1-201ENST00000297369 291 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MIR628-201ENST00000385229 95 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AL451074.5-201ENST00000415894 435 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC092423.1-201ENST00000430165 186 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MYL8P-204ENST00000431574 518 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MTCO3P29-201ENST00000432119 779 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC093414.1-201ENST00000434712 514 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 USP9YP7-201ENST00000436723 430 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC004383.1-201ENST00000438135 289 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 LINC02210-201ENST00000444561 288 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC073587.1-201ENST00000447093 876 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 USP9YP32-201ENST00000452432 430 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 SNORD125-201ENST00000459538 96 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 RNU6-1037P-201ENST00000459571 107 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC087588.1-201ENST00000462203 316 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC133134.1-201ENST00000466800 359 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC097484.1-201ENST00000471148 389 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC108145.1-201ENST00000503770 153 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 RNU6-143P-201ENST00000516942 93 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 RNA5SP373-201ENST00000517271 95 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC109329.1-201ENST00000518744 317 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MIR1273C-201ENST00000578669 77 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC010620.2-201ENST00000600135 313 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MIR6780A-201ENST00000615089 68 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 MIR6133-201ENST00000617057 108 ntBASIC5.55□□□□□ -1.52
RNF135Q8IUD6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF135Q8IUD6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AC083843.2-201ENST00000568248 6253 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 ZNF299P-201ENST00000406845 1804 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AC009812.4-201ENST00000569134 1805 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 RNY1-201ENST00000364228 113 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 RNA5SP455-201ENST00000365190 119 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 Y_RNA.471-201ENST00000384312 102 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 MIR301A-201ENST00000385261 86 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 U3.42-201ENST00000408746 214 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 RNA5SP296-201ENST00000410523 111 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AL513331.1-201ENST00000411908 397 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AC007098.1-201ENST00000420122 367 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AL359073.1-201ENST00000448036 403 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 NDUFB1P2-201ENST00000449477 176 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AL138752.1-201ENST00000452964 351 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 HMGN1P11-201ENST00000508668 303 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 RNU6-911P-201ENST00000516523 104 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF135Q8IUD6 AC107294.1-201ENST00000609524 467 ntBASIC5.54□□□□□ -1.52
RNF135Q8IUD6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms