Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 HMGB1P5-201ENST00000255320 642 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 RNU6-335P-201ENST00000364563 113 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 RNU1-133P-201ENST00000364867 167 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 MTCYBP24-201ENST00000420387 1106 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 PSMA2P3-201ENST00000429685 675 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 RPL37P6-202ENST00000464216 403 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 RPL21P103-201ENST00000479921 488 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 MTND3P24-201ENST00000506306 329 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 MIR5694-201ENST00000581190 76 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 PCNAP1-202ENST00000595299 752 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC106791.2-201ENST00000604680 391 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AL592494.3-201ENST00000609485 464 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC008669.1-201ENST00000565823 2178 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 MIR1304-201ENST00000408243 91 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 SSXP9-201ENST00000417503 292 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 AC005534.2-201ENST00000431047 433 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 NEFMP1-201ENST00000443423 1006 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.9□□□□□ -2.26
CSMD3Q7Z407 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC0.9□□□□□ -2.26
CSMD3Q7Z407 SNORD84-203ENST00000584275 78 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 AC091057.2-201ENST00000602594 792 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 HSPE1P14-201ENST00000605812 302 ntBASIC0.9□□□□□ -2.26
CSMD3Q7Z407 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
CSMD3Q7Z407 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
CSMD3Q7Z407 RNU6-492P-201ENST00000363035 104 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 Y_RNA.294-201ENST00000364916 102 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 SNORA70.7-201ENST00000384159 133 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 SNRPGP13-201ENST00000442212 177 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 NF1P3-201ENST00000457709 450 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AC008427.1-201ENST00000503102 655 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 RNU1-61P-201ENST00000516107 151 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 RNU1-92P-201ENST00000517017 135 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 BTF3P12-201ENST00000519620 469 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 OR10V3P-201ENST00000525712 725 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AC013553.2-201ENST00000604244 589 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AC096720.1-201ENST00000604441 183 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AC006329.2-201ENST00000611491 394 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AC010487.4-201ENST00000637027 61 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
CSMD3Q7Z407 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AL590233.1-201ENST00000430017 456 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 RPS15AP7-201ENST00000439294 405 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.9□□□□□ -2.27
CSMD3Q7Z407 AP002371.1-201ENST00000463604 433 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 MIR3690-201ENST00000580266 75 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 U73023.1-201ENST00000603134 700 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.9□□□□□ -2.27
CSMD3Q7Z407 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.9□□□□□ -2.27
CSMD3Q7Z407 CENPCP1-201ENST00000533085 2578 ntBASIC0.9□□□□□ -2.27
CSMD3Q7Z407 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.9□□□□□ -2.27
CSMD3Q7Z407 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 VTRNA1-3-201ENST00000365645 89 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AC244636.1-201ENST00000421152 228 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AC079776.3-201ENST00000450665 370 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 RPL21P39-201ENST00000463605 483 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 MIR4496-201ENST00000635896 61 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 RPL23AP41-201ENST00000484754 458 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 RPL37P25-201ENST00000507308 276 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 RNA5SP121-201ENST00000516537 101 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 MTND4LP24-201ENST00000572277 291 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 MTATP6P22-201ENST00000507369 598 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 NBEAP1-201ENST00000554452 979 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 VN1R107P-201ENST00000601784 209 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 MIR6076-201ENST00000617521 113 ntBASIC0.89□□□□□ -2.27
CSMD3Q7Z407 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.89□□□□□ -2.27
CSMD3Q7Z407 Y_RNA.60-201ENST00000362831 98 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 MIR320B1-201ENST00000390209 79 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC092447.6-201ENST00000414578 210 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AL512504.1-201ENST00000415494 778 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 CR848007.2-201ENST00000424918 787 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC096632.1-201ENST00000427395 310 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 RPL30P11-201ENST00000495304 339 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC010625.1-201ENST00000511296 403 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AP004607.1-201ENST00000524456 203 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms