Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC006989.1-201ENST00000427212 131 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC023347.2-201ENST00000433994 462 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 RSU1P2-202ENST00000437884 485 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.42□□□□□ -1.86
USP43Q70EL4 CALM1P1-201ENST00000442082 433 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.42□□□□□ -1.86
USP43Q70EL4 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 SNRPGP3-201ENST00000469405 227 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC093278.1-201ENST00000494700 600 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC112204.1-201ENST00000502591 103 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.42□□□□□ -1.86
USP43Q70EL4 RNU2-46P-201ENST00000517038 113 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC011611.1-201ENST00000552179 197 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.42□□□□□ -1.86
USP43Q70EL4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.42□□□□□ -1.86
USP43Q70EL4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC008687.2-201ENST00000597865 520 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC113139.1-201ENST00000605049 239 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC134503.1-201ENST00000633048 54 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 RLIMP1-201ENST00000339626 1680 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP43Q70EL4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU6-451P-201ENST00000362921 107 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 Y_RNA.145-201ENST00000363527 102 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU6-1085P-201ENST00000363576 107 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 RNY3P3-201ENST00000363816 102 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU6-359P-201ENST00000365466 108 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 SNORD42.2-201ENST00000365570 69 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 Y_RNA.474-201ENST00000384341 102 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU6-331P-201ENST00000384724 107 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU2-37P-201ENST00000410695 177 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AL158071.1-201ENST00000430315 461 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 SNRPEP7-201ENST00000438350 220 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU6-420P-201ENST00000458780 107 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU7-136P-201ENST00000458819 69 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.41□□□□□ -1.86
USP43Q70EL4 CCDC34P1-201ENST00000507441 517 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 FTH1P21-201ENST00000512179 511 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU6-202P-201ENST00000515998 96 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 RNU6-1003P-201ENST00000517099 105 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AP004242.1-201ENST00000533701 349 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC011602.1-201ENST00000546484 331 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC093249.1-201ENST00000567049 203 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC006270.2-201ENST00000578523 652 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 MIR3682-201ENST00000581338 84 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 NRBF2P1-201ENST00000587407 859 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC018638.8-201ENST00000588755 281 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC011712.1-201ENST00000588959 234 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 HMGN1P30-201ENST00000589286 268 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC006504.6-201ENST00000590142 199 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AL669831.4-202ENST00000590817 238 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 SNRPGP17-201ENST00000603780 214 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AL132822.1-201ENST00000617063 513 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.41□□□□□ -1.86
USP43Q70EL4 7SK.10-201ENST00000621414 298 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC110994.2-201ENST00000635481 492 ntBASIC3.41□□□□□ -1.86
USP43Q70EL4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP43Q70EL4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
USP43Q70EL4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP43Q70EL4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
USP43Q70EL4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
USP43Q70EL4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP43Q70EL4 MTND4P14-201ENST00000435799 1354 ntBASIC3.4□□□□□ -1.86
USP43Q70EL4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
USP43Q70EL4 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.86
USP43Q70EL4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP43Q70EL4 RNA5SP399-201ENST00000364003 117 ntBASIC3.4□□□□□ -1.87
USP43Q70EL4 RNY4P34-201ENST00000364779 95 ntBASIC3.4□□□□□ -1.87
USP43Q70EL4 RNU6-1318P-201ENST00000365389 103 ntBASIC3.4□□□□□ -1.87
USP43Q70EL4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.4□□□□□ -1.87
USP43Q70EL4 RNU6-1105P-201ENST00000384774 107 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms