Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 SEPT7P5-201ENST00000434048 306 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 MTCO1P53-201ENST00000441633 699 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 WASF1P1-201ENST00000447560 1131 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC147055.4-201ENST00000504399 745 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 AP001317.1-201ENST00000531194 960 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC090502.2-201ENST00000549267 280 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 MTND3P13-201ENST00000574391 343 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 SNORD53-201ENST00000579969 78 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 AL121917.1-203ENST00000605534 577 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC092954.1-201ENST00000609121 445 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC107294.1-201ENST00000609524 467 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC079395.3-201ENST00000615161 484 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC123767.1-202ENST00000620407 817 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC009812.4-201ENST00000569134 1805 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC010680.1-201ENST00000590024 3590 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 RNU6-1197P-201ENST00000391183 107 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 UBE2V1P2-201ENST00000397758 440 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC009963.1-201ENST00000417265 157 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC092634.6-201ENST00000418558 192 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 MTCO2P23-201ENST00000425216 680 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AL358075.3-201ENST00000426289 226 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC109486.1-201ENST00000486833 374 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC090255.1-201ENST00000495779 349 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC119751.4-201ENST00000507498 357 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC006390.1-201ENST00000508068 283 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC109329.2-201ENST00000519658 482 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC103783.1-201ENST00000520506 373 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 ZNF705CP-201ENST00000530515 889 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC093519.1-201ENST00000566109 298 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AGGF1P5-201ENST00000567900 919 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC015688.2-201ENST00000584523 262 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AL355877.2-201ENST00000603670 358 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC010738.1-201ENST00000604970 987 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC026790.2-201ENST00000606282 430 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC009090.3-201ENST00000616553 565 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 MIR6132-201ENST00000622083 109 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AL157770.1-201ENST00000623049 439 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC012640.5-201ENST00000623897 319 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AP003485.1-201ENST00000625093 753 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC093591.3-201ENST00000634516 308 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC099654.9-201ENST00000637055 678 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AC022336.2-201ENST00000568966 2538 ntBASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SMARCD3Q6STE5 AP005901.5-201ENST00000545779 1796 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 RNU6-492P-201ENST00000363035 104 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 RNU6-1066P-201ENST00000363573 105 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 snoZ40.1-201ENST00000364540 72 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 RNU6-301P-201ENST00000384277 107 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 SNORA51.11-201ENST00000384442 131 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 SNORD116-12-201ENST00000384468 92 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 RNU6-925P-201ENST00000384629 104 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 RNU6-1300P-201ENST00000391046 108 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 AL121978.1-201ENST00000402778 359 ntBASIC1.98□□□□□ -2.09
SMARCD3Q6STE5 HMGB3P2-201ENST00000411913 584 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms