Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.6□□□□□ -1.67
E4F1Q66K89 Y_RNA.631-201ENST00000459607 101 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 TRBV1-201ENST00000476502 284 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 HMGB3P15-201ENST00000507326 574 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 HIGD1AP13-201ENST00000509878 289 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 RNU6-685P-201ENST00000517088 95 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.6□□□□□ -1.67
E4F1Q66K89 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.6□□□□□ -1.67
E4F1Q66K89 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.6□□□□□ -1.67
E4F1Q66K89 MIR3672-201ENST00000584290 82 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 AC020914.4-201ENST00000597690 277 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
E4F1Q66K89 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
E4F1Q66K89 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
E4F1Q66K89 MTCO1P12-201ENST00000414273 1543 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
E4F1Q66K89 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
E4F1Q66K89 AC116667.1-201ENST00000604855 2072 ntBASIC4.6□□□□□ -1.67
E4F1Q66K89 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
E4F1Q66K89 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 AC103710.2-202ENST00000641454 2853 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
E4F1Q66K89 OR5P1P-201ENST00000299512 925 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.59□□□□□ -1.67
E4F1Q66K89 RNU6-356P-201ENST00000384140 107 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.59□□□□□ -1.67
E4F1Q66K89 RPL23AP1-201ENST00000428990 471 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.59□□□□□ -1.67
E4F1Q66K89 GPM6BP2-201ENST00000432046 144 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 AL356535.1-201ENST00000440335 398 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 NEFMP1-201ENST00000443423 1006 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 GPM6BP1-201ENST00000446387 144 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.59□□□□□ -1.67
E4F1Q66K89 AC130509.1-201ENST00000464158 433 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.59□□□□□ -1.67
E4F1Q66K89 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.59□□□□□ -1.67
E4F1Q66K89 RNA5SP454-201ENST00000517231 127 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 RNU6-840P-201ENST00000517275 65 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 IGKV2-38-201ENST00000517443 247 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.59□□□□□ -1.67
E4F1Q66K89 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 APOOP3-201ENST00000536787 586 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AP006289.1-201ENST00000538089 277 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AC135001.1-201ENST00000544546 283 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AC138761.3-201ENST00000579993 334 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
E4F1Q66K89 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.59□□□□□ -1.67
E4F1Q66K89 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.59□□□□□ -1.67
E4F1Q66K89 AL670379.10-201ENST00000604330 253 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AL670379.9-201ENST00000605428 253 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AL080274.1-201ENST00000605565 220 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AC124303.1-201ENST00000605703 360 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AC022893.3-201ENST00000607665 437 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 MIR7702-201ENST00000621931 59 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AC007998.5-201ENST00000622938 237 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AL355480.1-201ENST00000629041 99 ntBASIC4.59□□□□□ -1.67
E4F1Q66K89 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.59□□□□□ -1.67
E4F1Q66K89 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
E4F1Q66K89 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
E4F1Q66K89 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 DDX18P3-201ENST00000404856 2007 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.58□□□□□ -1.68
E4F1Q66K89 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 AC079741.1-201ENST00000321498 212 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 RNU6-254P-201ENST00000363377 107 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 SNORD70.1-201ENST00000391007 85 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 CISD1P1-201ENST00000393907 327 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AL139039.1-201ENST00000401900 692 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 RPL5P18-201ENST00000406671 891 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 RN7SKP158-201ENST00000410453 326 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.58□□□□□ -1.68
E4F1Q66K89 BX682237.1-201ENST00000415016 335 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 RPL26P29-201ENST00000415623 438 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AC090774.1-201ENST00000435925 246 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AC104058.1-201ENST00000448028 297 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.58□□□□□ -1.68
E4F1Q66K89 Y_RNA.639-201ENST00000458981 102 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AC018638.3-201ENST00000461273 132 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
E4F1Q66K89 AC090096.1-201ENST00000489168 390 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.58□□□□□ -1.68
E4F1Q66K89 RN7SL812P-201ENST00000493791 279 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.58□□□□□ -1.68
E4F1Q66K89 RPS27P27-201ENST00000498779 255 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 MTND5P5-201ENST00000503764 376 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.58□□□□□ -1.68
E4F1Q66K89 Y_RNA.689-201ENST00000516589 107 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 COPS8P3-201ENST00000526024 482 ntBASIC4.58□□□□□ -1.68
E4F1Q66K89 ELOCP31-201ENST00000540463 467 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms