Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 OR8R1P-201ENST00000543943 764 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC006960.3-201ENST00000561845 705 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AGGF1P4-201ENST00000568249 801 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AL391840.1-201ENST00000571144 367 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 GLUD1P4-201ENST00000590914 418 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 DPPA3P3-201ENST00000603842 430 ntBASIC3.81□□□□□ -1.8
CCDC38Q502W7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC38Q502W7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC38Q502W7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC38Q502W7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCDC38Q502W7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC38Q502W7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC38Q502W7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC073343.1-201ENST00000328239 651 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 RPL7P26-201ENST00000333817 754 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 RNU6-39P-201ENST00000384344 107 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 SNORD116-4-201ENST00000384733 96 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCDC38Q502W7 RNA5SP424-201ENST00000390988 115 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC38Q502W7 MTCO3P41-201ENST00000414801 328 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC133104.1-201ENST00000429100 218 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 SETP5-201ENST00000437270 562 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC122718.1-201ENST00000439448 744 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AL590664.1-201ENST00000448065 339 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC079448.1-201ENST00000449377 373 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 TPTE2P5-203ENST00000458118 728 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC087588.1-201ENST00000462203 316 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 FAM133DP-201ENST00000464802 691 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 RPS4XP22-201ENST00000480755 780 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC092185.1-201ENST00000491371 97 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC38Q502W7 SNORA31.3-201ENST00000516029 96 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CCDC38Q502W7 HMGB1P41-201ENST00000520234 440 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AP003392.2-201ENST00000527269 208 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AP003072.2-201ENST00000527756 676 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC38Q502W7 TRAV28-201ENST00000557548 323 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AL845331.3-202ENST00000562856 261 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC106785.1-201ENST00000565935 262 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC107294.3-201ENST00000609211 526 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 AC058791.1-201ENST00000608412 3198 ntBASIC3.8□□□□□ -1.8
CCDC38Q502W7 RNU6-805P-201ENST00000365643 106 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 RNU5A-6P-201ENST00000384136 116 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 MIR30B-201ENST00000384850 88 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC38Q502W7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 MED13P1-201ENST00000428342 171 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 U3.44-201ENST00000458938 192 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 AC084357.1-201ENST00000473404 255 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 Y_RNA.655-201ENST00000515919 96 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 AC067852.3-201ENST00000589177 561 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 AL136363.1-201ENST00000605349 337 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 MTND1P37-201ENST00000636562 264 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC38Q502W7 AL049641.1-201ENST00000441055 1948 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC38Q502W7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 AC007256.1-201ENST00000392253 2765 ntBASIC3.79□□□□□ -1.8
CCDC38Q502W7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC38Q502W7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC38Q502W7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC38Q502W7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 RNU4-75P-201ENST00000364621 146 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 MIR558-201ENST00000384920 94 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 RNU2-33P-201ENST00000410344 192 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 RNU2-66P-201ENST00000410650 161 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 HMGB3P20-201ENST00000417997 600 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 HMGB1P27-201ENST00000431429 603 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 Z82210.1-201ENST00000440037 231 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 NEFMP1-201ENST00000443423 1006 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 RPL30P14-201ENST00000482744 348 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC138853.1-201ENST00000503549 823 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms