| CRY2 | Q49AN0 | AL592295.2-201 | ENST00000612578 | 206 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC092142.2-201 | ENST00000614642 | 354 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | ERBIN-204 | ENST00000380943 | 6410 nt | APPRIS P3 TSL 1 (best) BASIC | 3.43 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | KIAA1109-203 | ENST00000388738 | 15574 nt | APPRIS P1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RNU6-754P-201 | ENST00000391166 | 107 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RN7SKP285-201 | ENST00000410137 | 318 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RN7SKP58-201 | ENST00000411010 | 305 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC091705.1-201 | ENST00000412197 | 209 nt | TSL 5 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC007179.1-201 | ENST00000415159 | 438 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RPL23AP39-201 | ENST00000415533 | 405 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL353771.1-201 | ENST00000422107 | 457 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC093843.1-201 | ENST00000424395 | 512 nt | TSL 2 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL445669.1-201 | ENST00000426743 | 755 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | TBL1XR1-AS1-201 | ENST00000454723 | 414 nt | TSL 5 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC008883.2-201 | ENST00000505796 | 414 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC097478.1-204 | ENST00000509723 | 547 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RNU6-1129P-201 | ENST00000515964 | 104 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL163153.1-201 | ENST00000554223 | 283 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | C16orf97-203 | ENST00000566314 | 281 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RPL23AP84-201 | ENST00000571193 | 464 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AP001004.1-201 | ENST00000582468 | 324 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC008751.2-201 | ENST00000597885 | 980 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | NIFKP6-201 | ENST00000598115 | 845 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL139344.1-201 | ENST00000605228 | 195 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | SOX2OT_exon1.1-201 | ENST00000614902 | 232 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL603758.1-201 | ENST00000618654 | 241 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC006111.3-201 | ENST00000622137 | 383 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC112204.3-201 | ENST00000623822 | 332 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC079416.3-201 | ENST00000624479 | 549 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC091965.5-201 | ENST00000624785 | 342 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | SCOC-202 | ENST00000394201 | 1795 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | FNBP1L-203 | ENST00000370253 | 3889 nt | APPRIS ALT1 TSL 5 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | CYLC2-201 | ENST00000374798 | 2171 nt | APPRIS P1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | ATXN3L-201 | ENST00000380622 | 2164 nt | APPRIS P1 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC107029.2-201 | ENST00000462011 | 2305 nt | TSL 2 BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | ASNSP3-201 | ENST00000451989 | 1306 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | SLC39A10-202 | ENST00000409086 | 5432 nt | APPRIS P1 TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | SENP7-204 | ENST00000394085 | 1483 nt | TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RNU6-223P-201 | ENST00000362830 | 107 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RNU6-769P-201 | ENST00000384407 | 104 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | SNORA46-201 | ENST00000384762 | 135 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RPS4XP3-201 | ENST00000398541 | 413 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RNA5SP508-201 | ENST00000411327 | 119 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC245291.1-201 | ENST00000419501 | 328 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL645937.4-201 | ENST00000419702 | 389 nt | TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL590783.1-201 | ENST00000424138 | 456 nt | TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC233728.2-201 | ENST00000425348 | 757 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL590383.1-201 | ENST00000428602 | 75 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC135721.1-201 | ENST00000497954 | 479 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC093297.2-205 | ENST00000508123 | 572 nt | TSL 3 BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC091996.1-201 | ENST00000522274 | 600 nt | TSL 3 BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | LINC02235-201 | ENST00000534675 | 466 nt | TSL 5 BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | HOMER1-205 | ENST00000535690 | 642 nt | TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC023510.1-201 | ENST00000555862 | 490 nt | TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AL353778.1-201 | ENST00000603149 | 408 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | FBXW7-AS1-201 | ENST00000605147 | 372 nt | TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC091965.4-201 | ENST00000607691 | 587 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC008121.2-201 | ENST00000614647 | 523 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | MIR6076-201 | ENST00000617521 | 113 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AP000676.3-201 | ENST00000623299 | 569 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC093010.3-201 | ENST00000570269 | 15214 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | DMD-201 | ENST00000288447 | 3856 nt | TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | MUM1L1-203 | ENST00000372552 | 3957 nt | APPRIS P1 TSL 5 BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | PKHD1L1-201 | ENST00000378402 | 13076 nt | APPRIS P1 TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | AC092593.1-201 | ENST00000515413 | 1815 nt | BASIC | 3.4 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | IKZF2-213 | ENST00000457361 | 9350 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.86 | | |
| CRY2 | Q49AN0 | RNA5SP383-201 | ENST00000362934 | 120 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | SNORA23-201 | ENST00000365128 | 182 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | LINC00862-202 | ENST00000367356 | 759 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | DEFB119-202 | ENST00000376315 | 324 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL356057.3-201 | ENST00000402607 | 340 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL022329.2-201 | ENST00000413494 | 660 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | LINC01794-201 | ENST00000420187 | 549 nt | TSL 4 BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AC092573.2-201 | ENST00000434546 | 243 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL513043.1-201 | ENST00000439124 | 535 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL359385.1-201 | ENST00000456509 | 365 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | HMGN2P13-201 | ENST00000476476 | 274 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | TRBV12-1-201 | ENST00000479785 | 344 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | RPL30P14-201 | ENST00000482744 | 348 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AC008015.1-201 | ENST00000555505 | 465 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | UBE2L4-201 | ENST00000587688 | 464 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | Z99289.3-201 | ENST00000605586 | 594 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AC018638.7-201 | ENST00000605836 | 1114 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | 5S_rRNA.12-201 | ENST00000617631 | 107 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL354810.1-201 | ENST00000618134 | 635 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL158801.5-201 | ENST00000623123 | 465 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AC092608.2-201 | ENST00000624427 | 218 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | TRIQK-212 | ENST00000520686 | 1808 nt | APPRIS P1 TSL 1 (best) BASIC | 3.4 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL021368.2-201 | ENST00000606125 | 5352 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | SLC27A2-203 | ENST00000544960 | 2025 nt | TSL 2 BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL353746.1-201 | ENST00000566293 | 6881 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | OR52E2-201 | ENST00000321522 | 978 nt | APPRIS P1 BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | RNU1-35P-201 | ENST00000362782 | 153 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | MEIG1-201 | ENST00000378240 | 507 nt | APPRIS P1 TSL 2 BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | SNORA1.3-201 | ENST00000384676 | 136 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | MIR512-1-201 | ENST00000384913 | 84 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | RNU6-1197P-201 | ENST00000391183 | 107 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | RPS27L-202 | ENST00000411926 | 528 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | TEX41-202 | ENST00000414256 | 604 nt | TSL 5 BASIC | 3.39 | □□□□□ -1.87 | | |
| CRY2 | Q49AN0 | AL078645.1-201 | ENST00000414377 | 423 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |