Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.69□□□□□ -1.66
SSRP1Q08945 AC092001.1-201ENST00000453012 261 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AL590639.1-201ENST00000456484 337 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AMD1P1-201ENST00000457220 922 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 HMGB3P30-201ENST00000457863 606 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 Y_RNA.665-201ENST00000516177 98 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 RNU6-677P-201ENST00000516914 101 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 RN7SKP60-201ENST00000516985 239 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AC107953.1-201ENST00000522216 297 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.69□□□□□ -1.66
SSRP1Q08945 AC109635.4-202ENST00000531666 412 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.69□□□□□ -1.66
SSRP1Q08945 AL121576.1-201ENST00000556055 276 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AC022968.1-201ENST00000567372 442 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 RPL23AP84-201ENST00000571193 464 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
SSRP1Q08945 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSRP1Q08945 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.68□□□□□ -1.66
SSRP1Q08945 MTND4P35-201ENST00000604257 1375 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSRP1Q08945 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSRP1Q08945 RNA5SP130-201ENST00000364431 114 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.68□□□□□ -1.66
SSRP1Q08945 AC068538.1-201ENST00000376856 336 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 RPS26P8-201ENST00000393490 348 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 RNU6-1148P-201ENST00000410992 104 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AL160275.2-201ENST00000412010 394 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AL645937.1-202ENST00000421799 937 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.68□□□□□ -1.66
SSRP1Q08945 RPL7L1P10-201ENST00000427790 463 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.68□□□□□ -1.66
SSRP1Q08945 AL365400.1-201ENST00000431854 640 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 USP9YP7-201ENST00000436723 430 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.68□□□□□ -1.66
SSRP1Q08945 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.68□□□□□ -1.66
SSRP1Q08945 USP9YP32-201ENST00000452432 430 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.68□□□□□ -1.66
SSRP1Q08945 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.68□□□□□ -1.66
SSRP1Q08945 SNORA31.3-201ENST00000516029 96 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 RNU6-123P-201ENST00000516163 102 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 MYL12AP1-201ENST00000518490 515 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 SNRPGP16-201ENST00000533275 226 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.68□□□□□ -1.66
SSRP1Q08945 PSMA3P-201ENST00000555485 635 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AL355836.1-201ENST00000555951 870 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AC005255.1-201ENST00000593748 216 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.68□□□□□ -1.66
SSRP1Q08945 DPPA3P3-201ENST00000603842 430 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AC009233.1-201ENST00000616477 371 ntBASIC4.68□□□□□ -1.66
SSRP1Q08945 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSRP1Q08945 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSRP1Q08945 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SSRP1Q08945 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSRP1Q08945 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSRP1Q08945 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.67□□□□□ -1.66
SSRP1Q08945 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AL157700.1-201ENST00000561973 1432 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSRP1Q08945 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSRP1Q08945 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSRP1Q08945 RNU6-522P-201ENST00000364497 107 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 Y_RNA.529-201ENST00000384586 119 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSRP1Q08945 RNU6-817P-201ENST00000391083 104 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 MIR1251-201ENST00000408552 70 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 RNA5SP306-201ENST00000411087 107 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 IFNA20P-201ENST00000436840 528 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 RNU6-953P-201ENST00000459154 107 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 RPL7P19-201ENST00000469948 618 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AC025445.1-201ENST00000502728 300 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 RPL7P20-201ENST00000520308 745 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.67□□□□□ -1.66
SSRP1Q08945 GNRHR2P1-201ENST00000555315 631 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 PARP1P2-201ENST00000556806 195 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 AC037471.2-201ENST00000564941 598 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AC008638.3-201ENST00000603341 463 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 AL138889.2-201ENST00000603883 242 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 AC087045.1-201ENST00000605856 382 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 MIR6868-201ENST00000611215 58 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 AL359547.2-201ENST00000615810 418 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.67□□□□□ -1.66
SSRP1Q08945 MIR492-201ENST00000638676 116 ntBASIC4.67□□□□□ -1.66
SSRP1Q08945 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSRP1Q08945 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
SSRP1Q08945 AP001350.1-201ENST00000601906 1524 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms