Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR6730-201ENST00000622213 67 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PCDH1Q08174 AL672167.1-204ENST00000641875 3017 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 SCARNA15-201ENST00000607520 4325 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDH1Q08174 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.86□□□□□ -1.63
PCDH1Q08174 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.86□□□□□ -1.63
PCDH1Q08174 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH1Q08174 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH1Q08174 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PCDH1Q08174 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH1Q08174 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH1Q08174 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PCDH1Q08174 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDH1Q08174 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDH1Q08174 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH1Q08174 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH1Q08174 RNU6-933P-201ENST00000384424 107 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 RNU6-1179P-201ENST00000384667 107 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH1Q08174 AL451062.2-201ENST00000427515 271 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH1Q08174 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH1Q08174 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH1Q08174 AL356981.1-201ENST00000454879 684 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 RN7SL610P-201ENST00000463845 291 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 RN7SL515P-201ENST00000463999 297 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 RN7SL222P-201ENST00000476452 299 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 FO393415.2-201ENST00000480085 343 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH1Q08174 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH1Q08174 ENPP7P9-201ENST00000514456 627 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH1Q08174 SNORA40.15-201ENST00000516884 107 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 RN7SKP260-201ENST00000516907 149 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDH1Q08174 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
PCDH1Q08174 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDH1Q08174 AC087783.2-201ENST00000605070 562 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 AC015914.2-201ENST00000618167 288 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 FP236240.3-201ENST00000623061 327 ntBASIC4.85□□□□□ -1.63
PCDH1Q08174 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH1Q08174 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDH1Q08174 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH1Q08174 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDH1Q08174 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH1Q08174 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH1Q08174 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDH1Q08174 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH1Q08174 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH1Q08174 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PCDH1Q08174 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PCDH1Q08174 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH1Q08174 RNA5SP52-201ENST00000362448 134 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 Y_RNA.26-201ENST00000362539 101 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 Y_RNA.64-201ENST00000362845 102 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 RNU4-50P-201ENST00000364361 141 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 SNORA20.1-201ENST00000364790 130 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 SNORA36C-201ENST00000384289 132 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 SNORA51.11-201ENST00000384442 131 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 Y_RNA.515-201ENST00000384535 112 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 MIR153-1-201ENST00000384914 90 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH1Q08174 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH1Q08174 AC119751.6-201ENST00000416712 186 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH1Q08174 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH1Q08174 AL592045.1-201ENST00000429867 352 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH1Q08174 RPS27P18-201ENST00000431701 247 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 RANP8-201ENST00000444720 713 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 FCF1P4-201ENST00000448326 183 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH1Q08174 RNU7-169P-201ENST00000459456 61 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AL591473.1-201ENST00000464297 313 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 SUMO2P6-201ENST00000505273 288 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 MTND1P19-201ENST00000511780 315 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 FTH1P9-201ENST00000513251 355 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 APOOP4-201ENST00000513530 597 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AC144568.1-201ENST00000520139 137 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 BNIP3P1-201ENST00000547295 580 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH1Q08174 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDH1Q08174 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH1Q08174 AC105254.2-201ENST00000603636 436 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 MIR3976-201ENST00000606807 139 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AC096772.1-201ENST00000609146 564 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AC006023.2-201ENST00000609916 167 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AL353748.2-201ENST00000622148 471 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 AL512643.1-201ENST00000635735 524 ntBASIC4.84□□□□□ -1.63
PCDH1Q08174 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH1Q08174 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH1Q08174 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDH1Q08174 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PCDH1Q08174 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PCDH1Q08174 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
PCDH1Q08174 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDH1Q08174 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms