Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL133241.1-201ENST00000556832 487 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 DEFB122-202ENST00000569013 197 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC024614.2-201ENST00000577584 372 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 BNIP3P19-201ENST00000605397 577 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 STMN1P1-201ENST00000617809 440 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC025048.6-202ENST00000627667 438 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL049641.1-201ENST00000441055 1948 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 RNA5SP125-201ENST00000364843 120 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 SNORD82-201ENST00000365530 70 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL356432.1-201ENST00000405809 419 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL450338.1-201ENST00000407987 512 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 PGBD4P6-201ENST00000421501 610 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL139415.2-201ENST00000431968 163 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 UBE2D3P1-201ENST00000436669 444 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 RPL7P36-201ENST00000444633 681 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 RAC1P7-201ENST00000445367 377 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC025181.1-201ENST00000477507 416 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 ANXA2P1-201ENST00000505539 926 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 LSM6P2-201ENST00000552208 177 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC011611.5-201ENST00000552477 578 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 LINC00933-203ENST00000559812 219 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC115989.2-201ENST00000578640 563 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 MIR5089-201ENST00000580047 84 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 SNRPGP19-201ENST00000603826 189 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC007038.2-201ENST00000608095 740 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC016542.1-201ENST00000608259 493 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC103710.1-201ENST00000610003 901 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL592148.2-201ENST00000612210 372 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC020658.4-201ENST00000613987 684 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AL590808.1-201ENST00000618696 141 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC010149.2-201ENST00000637608 315 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 ADAM3A-203ENST00000461344 2157 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.45□□□□□ -2.18
HIST1H1AQ02539 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
HIST1H1AQ02539 AC104454.1-201ENST00000421341 1401 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 RN7SKP223-201ENST00000410582 62 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AL109913.1-201ENST00000421173 514 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC003685.2-201ENST00000422795 395 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 Z98742.2-201ENST00000431564 187 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 Z85994.2-201ENST00000434327 452 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC024082.2-201ENST00000434771 238 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 OR10R1P-201ENST00000441524 1141 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 MTND1P33-201ENST00000446251 917 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC080013.2-201ENST00000460866 323 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 UBE2DNL-203ENST00000474922 222 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 RNU6-27P-201ENST00000516146 107 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 HIGD1AP6-201ENST00000521833 279 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AP005639.2-201ENST00000527592 928 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 OR5AL2P-201ENST00000532185 920 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 CBX3P7-201ENST00000532876 502 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 CBX3P4-201ENST00000538909 354 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 TRAV11-201ENST00000539512 339 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 HSBP1P1-201ENST00000555205 166 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 MIR3199-1-201ENST00000582434 88 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC010928.2-201ENST00000588017 287 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AL136981.2-201ENST00000617319 734 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 U4atac.1-201ENST00000618345 95 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AL391597.1-201ENST00000618707 694 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC009318.4-201ENST00000620496 486 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 AC116618.1-201ENST00000634617 774 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HIST1H1AQ02539 HSPA8P4-201ENST00000511877 1920 ntBASIC1.44□□□□□ -2.18
HIST1H1AQ02539 RNU6-1159P-201ENST00000362933 107 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 RNU6-253P-201ENST00000384730 105 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 SNORA3.2-201ENST00000408221 125 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms