Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.82□□□□□ -2.12
NUP98P52948 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP98P52948 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP98P52948 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NUP98P52948 RNU6-488P-201ENST00000515918 99 ntBASIC1.82□□□□□ -2.12
NUP98P52948 HAUS1P3-201ENST00000523909 662 ntBASIC1.82□□□□□ -2.12
NUP98P52948 AC098848.2-201ENST00000588023 330 ntBASIC1.82□□□□□ -2.12
NUP98P52948 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP98P52948 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.82□□□□□ -2.12
NUP98P52948 AC005539.1-201ENST00000443768 1479 ntBASIC1.82□□□□□ -2.12
NUP98P52948 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
NUP98P52948 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP98P52948 Y_RNA.40-201ENST00000362645 93 ntBASIC1.82□□□□□ -2.12
NUP98P52948 RPL23AP29-201ENST00000397284 453 ntBASIC1.82□□□□□ -2.12
NUP98P52948 MTND2P19-201ENST00000449129 1012 ntBASIC1.82□□□□□ -2.12
NUP98P52948 AC010099.1-201ENST00000455434 375 ntBASIC1.82□□□□□ -2.12
NUP98P52948 snoU13.18-201ENST00000459483 104 ntBASIC1.82□□□□□ -2.12
NUP98P52948 RN7SKP40-201ENST00000517211 242 ntBASIC1.82□□□□□ -2.12
NUP98P52948 SNORA31.24-201ENST00000517232 57 ntBASIC1.82□□□□□ -2.12
NUP98P52948 ACTR3BP3-201ENST00000565577 979 ntBASIC1.82□□□□□ -2.12
NUP98P52948 AC010928.2-201ENST00000588017 287 ntBASIC1.82□□□□□ -2.12
NUP98P52948 SEPT7P9-203ENST00000604116 343 ntBASIC1.82□□□□□ -2.12
NUP98P52948 U6.107-201ENST00000637108 79 ntBASIC1.82□□□□□ -2.12
NUP98P52948 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP98P52948 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NUP98P52948 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
NUP98P52948 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.81□□□□□ -2.12
NUP98P52948 AL513185.2-201ENST00000425543 193 ntBASIC1.81□□□□□ -2.12
NUP98P52948 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.81□□□□□ -2.12
NUP98P52948 RPL36P19-201ENST00000430744 301 ntBASIC1.81□□□□□ -2.12
NUP98P52948 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.81□□□□□ -2.12
NUP98P52948 RAD1P2-201ENST00000446414 663 ntBASIC1.81□□□□□ -2.12
NUP98P52948 SNRPGP6-201ENST00000451124 220 ntBASIC1.81□□□□□ -2.12
NUP98P52948 RPS29P29-201ENST00000456396 171 ntBASIC1.81□□□□□ -2.12
NUP98P52948 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.81□□□□□ -2.12
NUP98P52948 AC135721.1-201ENST00000497954 479 ntBASIC1.81□□□□□ -2.12
NUP98P52948 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NUP98P52948 MTND3P24-201ENST00000506306 329 ntBASIC1.81□□□□□ -2.12
NUP98P52948 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.81□□□□□ -2.12
NUP98P52948 MYL12BP1-201ENST00000569826 507 ntBASIC1.81□□□□□ -2.12
NUP98P52948 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
NUP98P52948 AC242628.1-201ENST00000606810 391 ntBASIC1.81□□□□□ -2.12
NUP98P52948 AC090116.1-201ENST00000615679 446 ntBASIC1.81□□□□□ -2.12
NUP98P52948 AC140725.3-201ENST00000616193 880 ntBASIC1.81□□□□□ -2.12
NUP98P52948 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NUP98P52948 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NUP98P52948 RNU6-1074P-201ENST00000383995 104 ntBASIC1.8□□□□□ -2.12
NUP98P52948 MIR767-201ENST00000390228 109 ntBASIC1.8□□□□□ -2.12
NUP98P52948 ANAPC10P1-201ENST00000395991 556 ntBASIC1.8□□□□□ -2.12
NUP98P52948 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.8□□□□□ -2.12
NUP98P52948 Z85994.2-201ENST00000434327 452 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.8□□□□□ -2.12
NUP98P52948 AC009296.1-201ENST00000443146 155 ntBASIC1.8□□□□□ -2.12
NUP98P52948 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP98P52948 AL137159.1-201ENST00000452808 512 ntBASIC1.8□□□□□ -2.12
NUP98P52948 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.8□□□□□ -2.12
NUP98P52948 snoU13.28-201ENST00000459235 104 ntBASIC1.8□□□□□ -2.12
NUP98P52948 OR52A4P-202ENST00000481634 799 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.8□□□□□ -2.12
NUP98P52948 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP98P52948 RPL37P25-201ENST00000507308 276 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.8□□□□□ -2.12
NUP98P52948 RNA5SP445-201ENST00000515889 115 ntBASIC1.8□□□□□ -2.12
NUP98P52948 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP98P52948 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP98P52948 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NUP98P52948 AC074051.3-201ENST00000570238 358 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC055876.5-201ENST00000605667 259 ntBASIC1.8□□□□□ -2.12
NUP98P52948 LINC00216-201ENST00000623548 1126 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC017104.5-201ENST00000637647 639 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC007342.9-201ENST00000623877 1385 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC087359.1-201ENST00000508335 1740 ntBASIC1.8□□□□□ -2.12
NUP98P52948 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.8□□□□□ -2.12
NUP98P52948 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NUP98P52948 RNU1-105P-201ENST00000363470 161 ntBASIC1.8□□□□□ -2.12
NUP98P52948 Y_RNA.508-201ENST00000384502 114 ntBASIC1.8□□□□□ -2.12
NUP98P52948 MIR493-201ENST00000385254 89 ntBASIC1.8□□□□□ -2.12
NUP98P52948 MTND4LP10-201ENST00000435146 291 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC004022.1-201ENST00000447766 1066 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC093770.1-201ENST00000511559 571 ntBASIC1.8□□□□□ -2.12
NUP98P52948 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.8□□□□□ -2.12
NUP98P52948 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP98P52948 CBX3P2-202ENST00000583365 535 ntBASIC1.8□□□□□ -2.12
NUP98P52948 U73023.1-201ENST00000603134 700 ntBASIC1.8□□□□□ -2.12
NUP98P52948 MIR6895-201ENST00000613497 78 ntBASIC1.8□□□□□ -2.12
NUP98P52948 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC018926.3-201ENST00000618841 406 ntBASIC1.8□□□□□ -2.12
NUP98P52948 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.8□□□□□ -2.12
NUP98P52948 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.8□□□□□ -2.12
NUP98P52948 Z82195.2-201ENST00000612348 18351 ntBASIC1.79□□□□□ -2.12
NUP98P52948 PABPC1P9-201ENST00000426076 1612 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.79□□□□□ -2.12
NUP98P52948 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NUP98P52948 HMGB3P31-201ENST00000413333 595 ntBASIC1.79□□□□□ -2.12
NUP98P52948 Z85995.1-201ENST00000415547 335 ntBASIC1.79□□□□□ -2.12
NUP98P52948 AL356320.2-201ENST00000417263 507 ntBASIC1.79□□□□□ -2.12
NUP98P52948 MTND2P21-201ENST00000436242 1042 ntBASIC1.79□□□□□ -2.12
NUP98P52948 UBE2V1P13-201ENST00000436983 439 ntBASIC1.79□□□□□ -2.12
NUP98P52948 FABP5P3-201ENST00000437960 408 ntBASIC1.79□□□□□ -2.12
NUP98P52948 OR10R1P-201ENST00000441524 1141 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms