Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC016769.3-201ENST00000396562 315 ntBASIC2.84□□□□□ -1.96
MSH6P52701 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.84□□□□□ -1.96
MSH6P52701 AL096701.2-201ENST00000416920 238 ntBASIC2.84□□□□□ -1.96
MSH6P52701 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.84□□□□□ -1.96
MSH6P52701 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.84□□□□□ -1.96
MSH6P52701 C1DP1-201ENST00000426049 402 ntBASIC2.84□□□□□ -1.96
MSH6P52701 AC129850.1-201ENST00000436203 508 ntBASIC2.84□□□□□ -1.96
MSH6P52701 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.84□□□□□ -1.96
MSH6P52701 AC093155.1-201ENST00000440164 826 ntBASIC2.84□□□□□ -1.96
MSH6P52701 SUMO2P5-201ENST00000506790 245 ntBASIC2.84□□□□□ -1.96
MSH6P52701 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.84□□□□□ -1.96
MSH6P52701 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.84□□□□□ -1.96
MSH6P52701 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.84□□□□□ -1.96
MSH6P52701 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.84□□□□□ -1.96
MSH6P52701 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.84□□□□□ -1.96
MSH6P52701 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.84□□□□□ -1.96
MSH6P52701 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.84□□□□□ -1.96
MSH6P52701 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MSH6P52701 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MSH6P52701 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH6P52701 RNU6-712P-201ENST00000410558 100 ntBASIC2.83□□□□□ -1.96
MSH6P52701 MTCO3P12-201ENST00000416718 547 ntBASIC2.83□□□□□ -1.96
MSH6P52701 SSXP9-201ENST00000417503 292 ntBASIC2.83□□□□□ -1.96
MSH6P52701 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH6P52701 AL445685.2-201ENST00000422551 342 ntBASIC2.83□□□□□ -1.96
MSH6P52701 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH6P52701 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH6P52701 SEPT7P5-201ENST00000434048 306 ntBASIC2.83□□□□□ -1.96
MSH6P52701 snoU109.4-201ENST00000458953 143 ntBASIC2.83□□□□□ -1.96
MSH6P52701 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MSH6P52701 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MSH6P52701 RNU1-61P-201ENST00000516107 151 ntBASIC2.83□□□□□ -1.96
MSH6P52701 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH6P52701 EEF1B2P4-201ENST00000551398 348 ntBASIC2.83□□□□□ -1.96
MSH6P52701 SETP2-201ENST00000553886 926 ntBASIC2.83□□□□□ -1.96
MSH6P52701 MIR3683-201ENST00000580847 82 ntBASIC2.83□□□□□ -1.96
MSH6P52701 AC010975.3-201ENST00000618727 978 ntBASIC2.83□□□□□ -1.96
MSH6P52701 AC018755.4-201ENST00000619715 454 ntBASIC2.83□□□□□ -1.96
MSH6P52701 AP003485.1-201ENST00000625093 753 ntBASIC2.83□□□□□ -1.96
MSH6P52701 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
MSH6P52701 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MSH6P52701 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
MSH6P52701 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH6P52701 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MSH6P52701 MTND4P35-201ENST00000604257 1375 ntBASIC2.82□□□□□ -1.96
MSH6P52701 AL139276.1-201ENST00000311910 1001 ntBASIC2.82□□□□□ -1.96
MSH6P52701 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH6P52701 RNU6-657P-201ENST00000383904 107 ntBASIC2.82□□□□□ -1.96
MSH6P52701 RNU6-298P-201ENST00000390888 96 ntBASIC2.82□□□□□ -1.96
MSH6P52701 SNORD65.1-201ENST00000390889 71 ntBASIC2.82□□□□□ -1.96
MSH6P52701 RNU2-28P-201ENST00000410457 189 ntBASIC2.82□□□□□ -1.96
MSH6P52701 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH6P52701 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH6P52701 AP1B1P2-201ENST00000416196 106 ntBASIC2.82□□□□□ -1.96
MSH6P52701 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH6P52701 RPL17P49-201ENST00000443728 411 ntBASIC2.82□□□□□ -1.96
MSH6P52701 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH6P52701 AL109741.2-201ENST00000455561 343 ntBASIC2.82□□□□□ -1.96
MSH6P52701 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH6P52701 AL049829.1-201ENST00000465411 156 ntBASIC2.82□□□□□ -1.96
MSH6P52701 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH6P52701 AC004062.1-201ENST00000509926 645 ntBASIC2.82□□□□□ -1.96
MSH6P52701 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.82□□□□□ -1.96
MSH6P52701 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH6P52701 AC239860.2-201ENST00000525886 270 ntBASIC2.82□□□□□ -1.96
MSH6P52701 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH6P52701 RNU6-1192P-201ENST00000612197 107 ntBASIC2.82□□□□□ -1.96
MSH6P52701 RNU6-489P-201ENST00000618289 107 ntBASIC2.82□□□□□ -1.96
MSH6P52701 AC010872.1-201ENST00000624225 675 ntBASIC2.82□□□□□ -1.96
MSH6P52701 AC091925.2-201ENST00000625059 256 ntBASIC2.82□□□□□ -1.96
MSH6P52701 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MSH6P52701 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
MSH6P52701 MTCO1P23-201ENST00000415223 1526 ntBASIC2.81□□□□□ -1.96
MSH6P52701 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
MSH6P52701 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
MSH6P52701 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MSH6P52701 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
MSH6P52701 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
MSH6P52701 DEFB109C-201ENST00000382575 264 ntBASIC2.81□□□□□ -1.96
MSH6P52701 DEFB109B-201ENST00000382656 264 ntBASIC2.81□□□□□ -1.96
MSH6P52701 RPL21P75-201ENST00000396599 483 ntBASIC2.81□□□□□ -1.96
MSH6P52701 RPL21P28-201ENST00000401418 483 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AL592114.1-201ENST00000403842 483 ntBASIC2.81□□□□□ -1.96
MSH6P52701 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MSH6P52701 RPL19P1-201ENST00000411635 428 ntBASIC2.81□□□□□ -1.96
MSH6P52701 MTND4P3-201ENST00000417829 541 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC099677.1-201ENST00000420575 175 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH6P52701 DPRXP1-201ENST00000426312 460 ntBASIC2.81□□□□□ -1.96
MSH6P52701 GTF2IP7-202ENST00000436677 309 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC092473.1-201ENST00000441098 221 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC079776.3-201ENST00000450665 370 ntBASIC2.81□□□□□ -1.96
MSH6P52701 snoU13.4-201ENST00000458916 104 ntBASIC2.81□□□□□ -1.96
MSH6P52701 RPL21P39-201ENST00000463605 483 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC011979.1-201ENST00000472300 483 ntBASIC2.81□□□□□ -1.96
MSH6P52701 RPL21P93-201ENST00000480465 489 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC233702.1-201ENST00000482905 502 ntBASIC2.81□□□□□ -1.96
MSH6P52701 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC093591.1-201ENST00000491435 481 ntBASIC2.81□□□□□ -1.96
MSH6P52701 AC104564.1-201ENST00000493028 407 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms