Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 Y_RNA.261-201ENST00000364631 102 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 SMIM11P1-201ENST00000369586 178 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 Y_RNA.533-201ENST00000384596 114 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 RNU6-700P-201ENST00000391043 107 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 RNU4-34P-201ENST00000410431 124 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 Y_RNA.602-201ENST00000410535 92 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 EI24P1-201ENST00000416584 867 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 AC104333.2-201ENST00000422630 192 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNA4P43681 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA4P43681 CEACAMP9-201ENST00000442990 513 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 ISCUP1-201ENST00000454451 448 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA4P43681 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA4P43681 RNU6-1219P-201ENST00000516143 112 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 EIF4A2P5-201ENST00000529914 499 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 CPDP1-201ENST00000579660 283 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 AC006272.2-201ENST00000594725 163 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 AL359881.1-201ENST00000602916 267 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNA4P43681 BX005214.3-202ENST00000619809 325 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 U6.92-201ENST00000636464 89 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 AL137003.2-201ENST00000606924 2538 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.04□□□□□ -1.6
CHRNA4P43681 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA4P43681 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.04□□□□□ -1.6
CHRNA4P43681 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA4P43681 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA4P43681 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
CHRNA4P43681 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHRNA4P43681 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 AP001148.1-201ENST00000624124 2359 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 SNORD113-8-201ENST00000363497 74 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 RNU6-1284P-201ENST00000363701 100 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 Y_RNA.400-201ENST00000383963 111 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL591034.2-201ENST00000402839 359 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL033519.2-201ENST00000403958 392 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA4P43681 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA4P43681 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA4P43681 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA4P43681 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA4P43681 SSXP4-201ENST00000451349 245 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL356981.1-201ENST00000454879 684 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.03□□□□□ -1.6
CHRNA4P43681 RN7SL515P-201ENST00000463999 297 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 PLGLA-201ENST00000465668 449 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA4P43681 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 RNU2-31P-201ENST00000516954 155 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA4P43681 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.03□□□□□ -1.6
CHRNA4P43681 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA4P43681 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA4P43681 AC011487.3-201ENST00000593607 453 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL670379.6-201ENST00000603753 252 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL670379.1-201ENST00000604752 252 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL670379.5-201ENST00000605253 252 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL670379.8-201ENST00000605353 252 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AL670379.7-201ENST00000605823 252 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA4P43681 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 FP236240.3-201ENST00000623061 327 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA4P43681 PRO1804-201ENST00000623780 2050 ntBASIC5.03□□□□□ -1.6
CHRNA4P43681 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHRNA4P43681 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA4P43681 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA4P43681 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA4P43681 ZNF299P-201ENST00000406845 1804 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA4P43681 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CHRNA4P43681 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CHRNA4P43681 Y_RNA.272-201ENST00000364696 102 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 RNA5SP428-201ENST00000365129 132 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.02□□□□□ -1.61
CHRNA4P43681 Y_RNA.480-201ENST00000384364 102 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 RNU6-102P-201ENST00000384485 104 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 MIR765-201ENST00000390226 114 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHRNA4P43681 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHRNA4P43681 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 RNU5E-9P-201ENST00000411164 104 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 AF186996.5-201ENST00000418098 904 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.02□□□□□ -1.61
CHRNA4P43681 HMGN2P27-201ENST00000427352 270 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms