Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC007687.1-201ENST00000602704 304 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 MIR98-201ENST00000606724 119 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AC103710.2-201ENST00000609912 942 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RNVU1-4-201ENST00000612985 164 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 AL357559.1-201ENST00000622228 274 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AC068880.5-201ENST00000624331 290 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN9P43378 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN9P43378 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN9P43378 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN9P43378 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN9P43378 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPN9P43378 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN9P43378 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PTPN9P43378 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN9P43378 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PTPN9P43378 RNU6-1097P-201ENST00000363586 107 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 RNU6-108P-201ENST00000365558 107 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN9P43378 MIR200C-201ENST00000384980 68 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 MIR181A1-201ENST00000385026 110 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN9P43378 RNA5SP107-201ENST00000411358 122 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 RNU2-71P-201ENST00000411395 189 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 FCF1P9-201ENST00000412546 282 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC007390.1-201ENST00000415722 356 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPN9P43378 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 RPL21P66-201ENST00000426566 466 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 ISCA1P1-201ENST00000426679 387 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPN9P43378 VDAC1P3-201ENST00000434069 851 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 PSPHP1-201ENST00000450062 261 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN9P43378 snoU13.4-201ENST00000458916 104 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC008481.1-201ENST00000463278 396 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC004801.2-202ENST00000463559 283 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 RPS15AP36-201ENST00000492022 382 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 VN1R104P-201ENST00000505115 1009 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPN9P43378 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.61□□□□□ -1.83
PTPN9P43378 SNORA31.22-201ENST00000517204 135 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN9P43378 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN9P43378 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN9P43378 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN9P43378 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN9P43378 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN9P43378 AC067852.3-201ENST00000589177 561 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC004067.1-201ENST00000608733 700 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AL355810.1-201ENST00000614629 552 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 SNHG22-203ENST00000617833 660 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC006338.1-201ENST00000618453 749 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPN9P43378 AC110801.1-201ENST00000623590 212 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AC124864.2-201ENST00000624736 186 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN9P43378 CR848007.1-201ENST00000442354 1699 ntBASIC3.61□□□□□ -1.83
PTPN9P43378 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
PTPN9P43378 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN9P43378 OR5J1P-201ENST00000313544 939 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 RNU6-169P-201ENST00000365336 107 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN9P43378 RNU6-517P-201ENST00000384362 110 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.6□□□□□ -1.83
PTPN9P43378 UBE2FP1-201ENST00000416536 447 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.6□□□□□ -1.83
PTPN9P43378 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN9P43378 MTCO2P11-201ENST00000431069 680 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AL358934.1-201ENST00000432346 324 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AC024082.2-201ENST00000434771 238 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 RPL26P6-201ENST00000440913 438 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AL662791.1-201ENST00000441992 928 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 AC093899.1-201ENST00000457984 376 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 SNORD97-201ENST00000459187 142 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 SNORA84-201ENST00000459229 133 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AL049714.1-201ENST00000466686 347 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 ARL2BPP6-201ENST00000512757 439 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.6□□□□□ -1.83
PTPN9P43378 ERHP1-201ENST00000523006 310 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 IGKV2D-19-201ENST00000523346 262 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN9P43378 OR5B10P-201ENST00000532869 642 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN9P43378 AC128657.1-201ENST00000549459 145 ntBASIC3.6□□□□□ -1.83
PTPN9P43378 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN9P43378 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms