Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC6A4P31645 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SLC6A4P31645 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC6A4P31645 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC6A4P31645 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SLC6A4P31645 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC6A4P31645 SNORD74.4-201ENST00000364129 80 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 RNU6-1029P-201ENST00000384109 107 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 MIR514A2-201ENST00000385131 88 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 MIR514A3-201ENST00000385132 88 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 RNU6-332P-201ENST00000391193 108 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 RNU6-903P-201ENST00000391270 109 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AL359634.1-202ENST00000404721 284 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AL606923.1-201ENST00000406616 190 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AL583834.1-201ENST00000406943 343 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 SNORA11.1-201ENST00000408133 129 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 SNORA3C-201ENST00000408792 125 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.06□□□□□ -1.76
SLC6A4P31645 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC6A4P31645 CALM2P2-201ENST00000428512 440 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC004866.2-201ENST00000438285 481 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC083863.1-201ENST00000438811 231 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 MTND3P16-201ENST00000452205 344 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 HMGN2P26-201ENST00000463169 339 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 RN7SL271P-201ENST00000487601 295 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC146944.2-203ENST00000502493 354 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC139495.1-202ENST00000513164 354 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC6A4P31645 RNA5SP143-201ENST00000516936 115 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 IGKV2-23-201ENST00000518729 323 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AP005435.4-201ENST00000529514 284 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 GLYCAM1-201ENST00000546596 285 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC126177.3-201ENST00000551839 688 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AL121603.1-201ENST00000553815 142 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 HSPE1P5-201ENST00000561489 272 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC037471.2-201ENST00000564941 598 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 MIR3944-201ENST00000581277 108 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.06□□□□□ -1.76
SLC6A4P31645 AF038458.1-201ENST00000588406 262 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AL354798.1-201ENST00000622505 329 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC025034.2-201ENST00000623264 286 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC110801.1-201ENST00000623590 212 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC067931.1-201ENST00000624190 671 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC6A4P31645 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SLC6A4P31645 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC6A4P31645 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC6A4P31645 AC103710.2-202ENST00000641454 2853 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC6A4P31645 TAB3P1-202ENST00000452645 1634 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 AC092326.2-201ENST00000624772 1561 ntBASIC4.06□□□□□ -1.76
SLC6A4P31645 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SLC6A4P31645 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
SLC6A4P31645 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC6A4P31645 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC6A4P31645 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC6A4P31645 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC6A4P31645 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 XIAPP3-201ENST00000312918 795 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 Y_RNA.356-201ENST00000365475 113 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 SNORD3H-201ENST00000384486 214 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 MIR1251-201ENST00000408552 70 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 RNU4-26P-201ENST00000410270 107 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC068533.1-201ENST00000418542 415 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 AC007389.2-201ENST00000434630 306 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC090774.1-201ENST00000435925 246 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC6A4P31645 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC6A4P31645 AC092001.1-201ENST00000453012 261 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC007547.1-201ENST00000462177 490 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.05□□□□□ -1.76
SLC6A4P31645 AC087241.2-201ENST00000535801 324 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC023050.3-201ENST00000541142 333 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC6A4P31645 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC6A4P31645 MIR5685-201ENST00000579080 79 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC6A4P31645 AC006116.10-201ENST00000591836 581 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC005255.1-201ENST00000593748 216 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AL139395.1-201ENST00000603662 160 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AC012603.1-201ENST00000606424 528 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 uc_338.5-201ENST00000611839 155 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 AL450472.3-201ENST00000615578 367 ntBASIC4.05□□□□□ -1.76
SLC6A4P31645 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SLC6A4P31645 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC6A4P31645 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.04□□□□□ -1.76
SLC6A4P31645 ZNF962P-201ENST00000443465 3140 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms