Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 OOSP1P1-201ENST00000423265 274 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 MYL8P-204ENST00000431574 518 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 AC112220.1-201ENST00000434628 355 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC9P31274 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC9P31274 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC9P31274 TXNP1-201ENST00000441872 371 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC9P31274 AL513328.1-201ENST00000446460 224 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 FTH1P25-201ENST00000447665 469 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC9P31274 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC9P31274 AC003982.1-202ENST00000469928 248 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC9P31274 AC021382.1-201ENST00000483523 359 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 AC078918.1-201ENST00000498515 228 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 SNORA31.21-201ENST00000517180 77 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC9P31274 HPRT1P3-201ENST00000539521 576 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC9P31274 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC9P31274 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC9P31274 AC090115.4-201ENST00000609970 188 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 AC008121.2-201ENST00000614647 523 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 MIR6817-201ENST00000615588 66 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC9P31274 AL356585.4-201ENST00000623078 1229 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC9P31274 CCT4P2-201ENST00000233836 1548 ntBASIC3.65□□□□□ -1.83
HOXC9P31274 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC9P31274 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC9P31274 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC9P31274 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC9P31274 AL390237.1-201ENST00000404226 1415 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HOXC9P31274 EXOC5P1-201ENST00000510543 1969 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC9P31274 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC9P31274 RNU6-335P-201ENST00000364563 113 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 AL138878.1-201ENST00000405131 347 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC9P31274 RAC1P3-201ENST00000416129 580 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 TOMM22P1-201ENST00000418578 312 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC9P31274 AC109583.1-201ENST00000432156 268 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC9P31274 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC9P31274 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC9P31274 RNU6-956P-201ENST00000458868 103 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC9P31274 AC128713.1-201ENST00000471495 306 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC9P31274 AC010486.1-201ENST00000511793 424 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 AP002748.2-201ENST00000528671 348 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HOXC9P31274 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC9P31274 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC9P31274 MTCYBP33-201ENST00000575007 1130 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC9P31274 MIR5697-201ENST00000578045 78 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 OR4K8P-201ENST00000578842 1048 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC9P31274 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC9P31274 AC090582.1-201ENST00000636321 199 ntBASIC3.64□□□□□ -1.83
HOXC9P31274 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC9P31274 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC9P31274 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC9P31274 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC9P31274 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC9P31274 FRG1BP-201ENST00000278882 761 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 SNORA31-201ENST00000362607 130 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 Y_RNA.436-201ENST00000384097 102 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 RNU6-114P-201ENST00000384704 105 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AL139095.1-201ENST00000404326 391 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 RNU2-37P-201ENST00000410695 177 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AL359704.1-201ENST00000411586 781 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 EI24P1-201ENST00000416584 867 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AL356583.2-201ENST00000426536 280 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC9P31274 RPL22P17-201ENST00000438729 315 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 NPM1P49-201ENST00000448027 714 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 MTND1P29-201ENST00000448112 647 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AL590365.1-201ENST00000450788 243 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 EEF1B2P7-201ENST00000451177 676 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AC104308.1-201ENST00000454621 333 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC9P31274 AP001086.1-201ENST00000494882 321 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
HOXC9P31274 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC9P31274 RNA5SP148-201ENST00000516527 94 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 MTCYBP41-201ENST00000528913 1123 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 OR5D17P-201ENST00000531492 978 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC9P31274 AC006362.1-201ENST00000567392 174 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AC060771.1-201ENST00000582031 164 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 MIR4435-1-201ENST00000582552 80 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 ZNF861P-201ENST00000588126 639 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 AC025594.3-201ENST00000613068 790 ntBASIC3.63□□□□□ -1.83
HOXC9P31274 ASNSP3-201ENST00000451989 1306 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms